Protein–RNA interactions for Protein: P18850

ATF6, Cyclic AMP-dependent transcription factor ATF-6 alpha, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF6P18850 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.5■□□□□ 0.23
ATF6P18850 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATF6P18850 LINC02447-202ENST00000501888 2146 ntBASIC16.5■□□□□ 0.23
ATF6P18850 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.5■□□□□ 0.23
ATF6P18850 SNX29P1-201ENST00000548357 1007 ntBASIC16.5■□□□□ 0.23
ATF6P18850 AC120045.2-201ENST00000567334 178 ntBASIC16.5■□□□□ 0.23
ATF6P18850 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF6P18850 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ATF6P18850 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF6P18850 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ATF6P18850 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATF6P18850 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF6P18850 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF6P18850 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATF6P18850 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.5■□□□□ 0.23
ATF6P18850 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.5■□□□□ 0.23
ATF6P18850 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
ATF6P18850 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.49■□□□□ 0.23
ATF6P18850 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.49■□□□□ 0.23
ATF6P18850 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF6P18850 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF6P18850 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.49■□□□□ 0.23
ATF6P18850 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.49■□□□□ 0.23
ATF6P18850 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.49■□□□□ 0.23
ATF6P18850 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATF6P18850 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATF6P18850 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF6P18850 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF6P18850 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF6P18850 MIR658-201ENST00000385210 100 ntBASIC16.49■□□□□ 0.23
ATF6P18850 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF6P18850 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.49■□□□□ 0.23
ATF6P18850 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF6P18850 AC119751.2-201ENST00000504529 210 ntBASIC16.49■□□□□ 0.23
ATF6P18850 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ATF6P18850 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.49■□□□□ 0.23
ATF6P18850 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.49■□□□□ 0.23
ATF6P18850 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.49■□□□□ 0.23
ATF6P18850 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.49■□□□□ 0.23
ATF6P18850 MIR6805-201ENST00000615055 62 ntBASIC16.49■□□□□ 0.23
ATF6P18850 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF6P18850 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ATF6P18850 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATF6P18850 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF6P18850 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATF6P18850 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATF6P18850 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.49■□□□□ 0.23
ATF6P18850 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATF6P18850 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ATF6P18850 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
ATF6P18850 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
ATF6P18850 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF6P18850 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF6P18850 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF6P18850 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATF6P18850 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATF6P18850 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATF6P18850 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
ATF6P18850 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ATF6P18850 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF6P18850 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF6P18850 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.48■□□□□ 0.23
ATF6P18850 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.48■□□□□ 0.23
ATF6P18850 C1QBPP1-201ENST00000400117 770 ntBASIC16.48■□□□□ 0.23
ATF6P18850 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ATF6P18850 SOCS2P1-201ENST00000417727 557 ntBASIC16.48■□□□□ 0.23
ATF6P18850 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.48■□□□□ 0.23
ATF6P18850 ACTG1P3-201ENST00000431775 1114 ntBASIC16.48■□□□□ 0.23
ATF6P18850 RPL13AP25-201ENST00000484130 612 ntBASIC16.48■□□□□ 0.23
ATF6P18850 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATF6P18850 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.48■□□□□ 0.23
ATF6P18850 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.48■□□□□ 0.23
ATF6P18850 MIR4259-201ENST00000584466 101 ntBASIC16.48■□□□□ 0.23
ATF6P18850 BTNL10-201ENST00000595971 695 ntBASIC16.48■□□□□ 0.23
ATF6P18850 AC233724.13-201ENST00000598383 410 ntBASIC16.48■□□□□ 0.23
ATF6P18850 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ATF6P18850 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF6P18850 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ATF6P18850 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.48■□□□□ 0.23
ATF6P18850 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF6P18850 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF6P18850 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.48■□□□□ 0.23
ATF6P18850 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATF6P18850 AC018665.1-201ENST00000622927 1362 ntBASIC16.48■□□□□ 0.23
ATF6P18850 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.48■□□□□ 0.23
ATF6P18850 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ATF6P18850 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.48■□□□□ 0.23
ATF6P18850 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF6P18850 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATF6P18850 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.47■□□□□ 0.23
ATF6P18850 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATF6P18850 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATF6P18850 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATF6P18850 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATF6P18850 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATF6P18850 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATF6P18850 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATF6P18850 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATF6P18850 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.47■□□□□ 0.23
ATF6P18850 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms