Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 AL080243.2-201ENST00000418783 582 ntBASIC13.87□□□□□ -0.19
CCL2P13500 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL2P13500 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.87□□□□□ -0.19
CCL2P13500 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
CCL2P13500 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.87□□□□□ -0.19
CCL2P13500 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CCL2P13500 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.87□□□□□ -0.19
CCL2P13500 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.87□□□□□ -0.19
CCL2P13500 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.87□□□□□ -0.19
CCL2P13500 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL2P13500 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL2P13500 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.87□□□□□ -0.19
CCL2P13500 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL2P13500 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.87□□□□□ -0.19
CCL2P13500 AL390955.2-201ENST00000603032 514 ntBASIC13.87□□□□□ -0.19
CCL2P13500 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL2P13500 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL2P13500 AC011477.6-201ENST00000604980 1927 ntBASIC13.87□□□□□ -0.19
CCL2P13500 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL2P13500 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL2P13500 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
CCL2P13500 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL2P13500 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL2P13500 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL2P13500 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL2P13500 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL2P13500 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL2P13500 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCL2P13500 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL2P13500 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL2P13500 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL2P13500 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL2P13500 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL2P13500 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL2P13500 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
CCL2P13500 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL2P13500 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL2P13500 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL2P13500 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL2P13500 TEX28P1-201ENST00000613479 1221 ntBASIC13.86□□□□□ -0.19
CCL2P13500 TEX28P2-201ENST00000617764 1221 ntBASIC13.86□□□□□ -0.19
CCL2P13500 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.86□□□□□ -0.19
CCL2P13500 AC063926.3-201ENST00000624734 5658 ntBASIC13.86□□□□□ -0.19
CCL2P13500 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL2P13500 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
CCL2P13500 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL2P13500 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CCL2P13500 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL2P13500 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCL2P13500 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
CCL2P13500 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL2P13500 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL2P13500 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL2P13500 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL2P13500 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL2P13500 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL2P13500 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.85□□□□□ -0.19
CCL2P13500 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL2P13500 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL2P13500 KRT8P12-202ENST00000472924 1397 ntBASIC13.85□□□□□ -0.19
CCL2P13500 AP002414.2-201ENST00000591780 3365 ntBASIC13.85□□□□□ -0.19
CCL2P13500 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL2P13500 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL2P13500 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL2P13500 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL2P13500 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CCL2P13500 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL2P13500 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL2P13500 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL2P13500 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.85□□□□□ -0.19
CCL2P13500 SPDYE17-201ENST00000412399 783 ntBASIC13.85□□□□□ -0.19
CCL2P13500 AC055876.3-201ENST00000431496 288 ntBASIC13.85□□□□□ -0.19
CCL2P13500 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.85□□□□□ -0.19
CCL2P13500 HLA-V-204ENST00000476601 1289 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms