Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COX4I1P13073 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.35■□□□□ 0.05
COX4I1P13073 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COX4I1P13073 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COX4I1P13073 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COX4I1P13073 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
COX4I1P13073 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COX4I1P13073 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COX4I1P13073 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COX4I1P13073 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.35■□□□□ 0.05
COX4I1P13073 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
COX4I1P13073 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.35■□□□□ 0.05
COX4I1P13073 MRPL20P1-201ENST00000400819 433 ntBASIC15.35■□□□□ 0.05
COX4I1P13073 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COX4I1P13073 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.35■□□□□ 0.05
COX4I1P13073 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.35■□□□□ 0.05
COX4I1P13073 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
COX4I1P13073 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.35■□□□□ 0.05
COX4I1P13073 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.35■□□□□ 0.05
COX4I1P13073 AP000550.4-202ENST00000639755 178 ntBASIC15.35■□□□□ 0.05
COX4I1P13073 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.35■□□□□ 0.05
COX4I1P13073 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.35■□□□□ 0.05
COX4I1P13073 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COX4I1P13073 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
COX4I1P13073 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COX4I1P13073 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.35■□□□□ 0.05
COX4I1P13073 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.35■□□□□ 0.05
COX4I1P13073 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
COX4I1P13073 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COX4I1P13073 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COX4I1P13073 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
COX4I1P13073 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COX4I1P13073 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COX4I1P13073 ZBED1P1-201ENST00000502364 1930 ntBASIC15.35■□□□□ 0.05
COX4I1P13073 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COX4I1P13073 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.35■□□□□ 0.05
COX4I1P13073 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COX4I1P13073 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.35■□□□□ 0.05
COX4I1P13073 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COX4I1P13073 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COX4I1P13073 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COX4I1P13073 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.34■□□□□ 0.05
COX4I1P13073 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COX4I1P13073 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
COX4I1P13073 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.34■□□□□ 0.05
COX4I1P13073 OR2I1P-209ENST00000641730 5365 ntBASIC15.34■□□□□ 0.05
COX4I1P13073 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
COX4I1P13073 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
COX4I1P13073 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COX4I1P13073 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
COX4I1P13073 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
COX4I1P13073 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.34■□□□□ 0.05
COX4I1P13073 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COX4I1P13073 KRT18P34-201ENST00000488218 1270 ntBASIC15.34■□□□□ 0.05
COX4I1P13073 KRT18P31-201ENST00000506277 1292 ntBASIC15.34■□□□□ 0.05
COX4I1P13073 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.34■□□□□ 0.05
COX4I1P13073 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.34■□□□□ 0.05
COX4I1P13073 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.34■□□□□ 0.05
COX4I1P13073 AL031432.2-201ENST00000566714 459 ntBASIC15.34■□□□□ 0.05
COX4I1P13073 AC002347.1-201ENST00000569543 541 ntBASIC15.34■□□□□ 0.05
COX4I1P13073 AL928711.1-201ENST00000570165 459 ntBASIC15.34■□□□□ 0.05
COX4I1P13073 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COX4I1P13073 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.34■□□□□ 0.05
COX4I1P13073 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
COX4I1P13073 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COX4I1P13073 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
COX4I1P13073 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COX4I1P13073 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
COX4I1P13073 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.34■□□□□ 0.05
COX4I1P13073 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
COX4I1P13073 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COX4I1P13073 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COX4I1P13073 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
COX4I1P13073 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.34■□□□□ 0.05
COX4I1P13073 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COX4I1P13073 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
COX4I1P13073 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.33■□□□□ 0.05
COX4I1P13073 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
COX4I1P13073 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
COX4I1P13073 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COX4I1P13073 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COX4I1P13073 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
COX4I1P13073 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
COX4I1P13073 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
COX4I1P13073 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
COX4I1P13073 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
COX4I1P13073 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.33■□□□□ 0.04
COX4I1P13073 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COX4I1P13073 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
COX4I1P13073 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COX4I1P13073 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.33■□□□□ 0.04
COX4I1P13073 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COX4I1P13073 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
COX4I1P13073 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
COX4I1P13073 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COX4I1P13073 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COX4I1P13073 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.33■□□□□ 0.04
COX4I1P13073 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.33■□□□□ 0.04
COX4I1P13073 AL645728.2-201ENST00000641974 660 ntBASIC15.33■□□□□ 0.04
COX4I1P13073 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms