Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
KRT3P12035 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT3P12035 MTND6P24-201ENST00000440466 518 ntBASIC16.75■□□□□ 0.27
KRT3P12035 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KRT3P12035 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT3P12035 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.75■□□□□ 0.27
KRT3P12035 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.75■□□□□ 0.27
KRT3P12035 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT3P12035 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT3P12035 AC069262.1-201ENST00000539058 672 ntBASIC16.75■□□□□ 0.27
KRT3P12035 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
KRT3P12035 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.75■□□□□ 0.27
KRT3P12035 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.75■□□□□ 0.27
KRT3P12035 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT3P12035 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT3P12035 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
KRT3P12035 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
KRT3P12035 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT3P12035 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KRT3P12035 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.75■□□□□ 0.27
KRT3P12035 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT3P12035 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
KRT3P12035 HYMAI-201ENST00000635591 3347 ntBASIC16.75■□□□□ 0.27
KRT3P12035 AC092127.1-201ENST00000567093 3455 ntBASIC16.75■□□□□ 0.27
KRT3P12035 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT3P12035 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.74■□□□□ 0.27
KRT3P12035 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
KRT3P12035 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT3P12035 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
KRT3P12035 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT3P12035 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.74■□□□□ 0.27
KRT3P12035 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 TSEN15P1-201ENST00000423257 515 ntBASIC16.74■□□□□ 0.27
KRT3P12035 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT3P12035 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.74■□□□□ 0.27
KRT3P12035 AC109322.1-201ENST00000524499 1264 ntBASIC16.74■□□□□ 0.27
KRT3P12035 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT3P12035 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT3P12035 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
KRT3P12035 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT3P12035 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT3P12035 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT3P12035 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
KRT3P12035 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT3P12035 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT3P12035 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT3P12035 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT3P12035 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
KRT3P12035 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT3P12035 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
KRT3P12035 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
KRT3P12035 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT3P12035 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
KRT3P12035 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
KRT3P12035 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT3P12035 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
KRT3P12035 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
KRT3P12035 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT3P12035 AL139400.1-201ENST00000366220 510 ntBASIC16.73■□□□□ 0.27
KRT3P12035 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT3P12035 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
KRT3P12035 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.73■□□□□ 0.27
KRT3P12035 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.73■□□□□ 0.27
KRT3P12035 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.73■□□□□ 0.27
KRT3P12035 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.73■□□□□ 0.27
KRT3P12035 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT3P12035 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT3P12035 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT3P12035 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT3P12035 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT3P12035 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT3P12035 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT3P12035 AC020658.6-201ENST00000623564 1870 ntBASIC16.73■□□□□ 0.27
KRT3P12035 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT3P12035 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.73■□□□□ 0.27
KRT3P12035 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT3P12035 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT3P12035 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT3P12035 AL513477.1-201ENST00000602865 2407 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms