Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM228BP0C875 AP3S2-216ENST00000617003 1561 ntBASIC16.94■□□□□ 0.3
FAM228BP0C875 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.94■□□□□ 0.3
FAM228BP0C875 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.94■□□□□ 0.3
FAM228BP0C875 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM228BP0C875 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.94■□□□□ 0.3
FAM228BP0C875 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM228BP0C875 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
FAM228BP0C875 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM228BP0C875 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.94■□□□□ 0.3
FAM228BP0C875 AGAP7P-201ENST00000582299 2062 ntBASIC16.94■□□□□ 0.3
FAM228BP0C875 AGAP14-201ENST00000624701 2060 ntBASIC16.94■□□□□ 0.3
FAM228BP0C875 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
FAM228BP0C875 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.94■□□□□ 0.3
FAM228BP0C875 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
FAM228BP0C875 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
FAM228BP0C875 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.94■□□□□ 0.3
FAM228BP0C875 HNRNPUP1-201ENST00000554987 333 ntBASIC16.94■□□□□ 0.3
FAM228BP0C875 KRT8P23-201ENST00000560090 1207 ntBASIC16.94■□□□□ 0.3
FAM228BP0C875 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FAM228BP0C875 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.94■□□□□ 0.3
FAM228BP0C875 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
FAM228BP0C875 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM228BP0C875 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM228BP0C875 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
FAM228BP0C875 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.94■□□□□ 0.3
FAM228BP0C875 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FAM228BP0C875 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM228BP0C875 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.94■□□□□ 0.3
FAM228BP0C875 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FAM228BP0C875 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.94■□□□□ 0.3
FAM228BP0C875 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM228BP0C875 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM228BP0C875 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.94■□□□□ 0.3
FAM228BP0C875 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 AC106881.1-201ENST00000605849 3329 ntBASIC16.93■□□□□ 0.3
FAM228BP0C875 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
FAM228BP0C875 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
FAM228BP0C875 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
FAM228BP0C875 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.93■□□□□ 0.3
FAM228BP0C875 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
FAM228BP0C875 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
FAM228BP0C875 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
FAM228BP0C875 AC126365.1-201ENST00000578585 1514 ntBASIC16.93■□□□□ 0.3
FAM228BP0C875 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
FAM228BP0C875 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.93■□□□□ 0.3
FAM228BP0C875 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.93■□□□□ 0.3
FAM228BP0C875 TIMM8BP1-201ENST00000452384 211 ntBASIC16.93■□□□□ 0.3
FAM228BP0C875 AC069335.1-201ENST00000489972 472 ntBASIC16.93■□□□□ 0.3
FAM228BP0C875 PGAM5P1-201ENST00000518923 814 ntBASIC16.93■□□□□ 0.3
FAM228BP0C875 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 SLC25A39P2-201ENST00000537614 270 ntBASIC16.93■□□□□ 0.3
FAM228BP0C875 AC040169.1-201ENST00000565382 521 ntBASIC16.93■□□□□ 0.3
FAM228BP0C875 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.93■□□□□ 0.3
FAM228BP0C875 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.93■□□□□ 0.3
FAM228BP0C875 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
FAM228BP0C875 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.93■□□□□ 0.3
FAM228BP0C875 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.93■□□□□ 0.3
FAM228BP0C875 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.93■□□□□ 0.3
FAM228BP0C875 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.93■□□□□ 0.3
FAM228BP0C875 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM228BP0C875 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.93■□□□□ 0.3
FAM228BP0C875 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
FAM228BP0C875 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.92■□□□□ 0.3
FAM228BP0C875 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FAM228BP0C875 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FAM228BP0C875 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
FAM228BP0C875 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
FAM228BP0C875 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.92■□□□□ 0.3
FAM228BP0C875 AL136379.1-201ENST00000623471 2642 ntBASIC16.92■□□□□ 0.3
FAM228BP0C875 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FAM228BP0C875 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.92■□□□□ 0.3
FAM228BP0C875 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.92■□□□□ 0.3
FAM228BP0C875 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FAM228BP0C875 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FAM228BP0C875 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
FAM228BP0C875 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
FAM228BP0C875 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms