Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40ALP0C0E4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 AP001282.1-201ENST00000531301 1499 ntBASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 RPL13P2-201ENST00000440687 659 ntBASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 IGHV3-71-201ENST00000523324 359 ntBASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 REXO1L8P-201ENST00000604378 1897 ntBASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40ALP0C0E4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAB40ALP0C0E4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.96□□□□□ -0.02
RAB40ALP0C0E4 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.96□□□□□ -0.02
RAB40ALP0C0E4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RAB40ALP0C0E4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAB40ALP0C0E4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RAB40ALP0C0E4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 TTTY23B-201ENST00000442790 549 ntBASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 RN7SL399P-201ENST00000471648 279 ntBASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 AC092552.1-201ENST00000547243 906 ntBASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 AC036164.1-201ENST00000570544 333 ntBASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 LINC01115-203ENST00000606068 577 ntBASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 AL391069.4-201ENST00000609583 481 ntBASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 WFDC1-204ENST00000613603 549 ntBASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 MIR8072-201ENST00000614241 80 ntBASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.95□□□□□ -0.02
RAB40ALP0C0E4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 BNIP3P1-202ENST00000550043 1585 ntBASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms