Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RB1P06400 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.65■□□□□ 0.26
RB1P06400 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RB1P06400 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RB1P06400 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RB1P06400 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
RB1P06400 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
RB1P06400 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.64■□□□□ 0.26
RB1P06400 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RB1P06400 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.64■□□□□ 0.26
RB1P06400 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RB1P06400 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.64■□□□□ 0.25
RB1P06400 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RB1P06400 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RB1P06400 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RB1P06400 AP001094.4-201ENST00000579008 2176 ntBASIC16.64■□□□□ 0.25
RB1P06400 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RB1P06400 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.64■□□□□ 0.25
RB1P06400 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.64■□□□□ 0.25
RB1P06400 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.64■□□□□ 0.25
RB1P06400 FNTAP2-201ENST00000430308 634 ntBASIC16.64■□□□□ 0.25
RB1P06400 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.64■□□□□ 0.25
RB1P06400 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.64■□□□□ 0.25
RB1P06400 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.64■□□□□ 0.25
RB1P06400 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.64■□□□□ 0.25
RB1P06400 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
RB1P06400 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.64■□□□□ 0.25
RB1P06400 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.64■□□□□ 0.25
RB1P06400 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RB1P06400 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.64■□□□□ 0.25
RB1P06400 BX539320.1-201ENST00000623759 877 ntBASIC16.64■□□□□ 0.25
RB1P06400 AC015967.2-201ENST00000624092 234 ntBASIC16.64■□□□□ 0.25
RB1P06400 AC006435.4-201ENST00000625037 234 ntBASIC16.64■□□□□ 0.25
RB1P06400 AL356737.1-201ENST00000634391 234 ntBASIC16.64■□□□□ 0.25
RB1P06400 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.64■□□□□ 0.25
RB1P06400 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.64■□□□□ 0.25
RB1P06400 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RB1P06400 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.64■□□□□ 0.25
RB1P06400 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RB1P06400 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RB1P06400 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RB1P06400 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.64■□□□□ 0.25
RB1P06400 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RB1P06400 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RB1P06400 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RB1P06400 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RB1P06400 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RB1P06400 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RB1P06400 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.63■□□□□ 0.25
RB1P06400 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RB1P06400 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.63■□□□□ 0.25
RB1P06400 AL138799.1-201ENST00000448213 1675 ntBASIC16.63■□□□□ 0.25
RB1P06400 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
RB1P06400 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.63■□□□□ 0.25
RB1P06400 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.63■□□□□ 0.25
RB1P06400 AC005077.2-201ENST00000449786 690 ntBASIC16.63■□□□□ 0.25
RB1P06400 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.63■□□□□ 0.25
RB1P06400 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.63■□□□□ 0.25
RB1P06400 ACTG1P17-201ENST00000558391 1119 ntBASIC16.63■□□□□ 0.25
RB1P06400 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.63■□□□□ 0.25
RB1P06400 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
RB1P06400 AC078925.2-201ENST00000624013 1973 ntBASIC16.63■□□□□ 0.25
RB1P06400 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RB1P06400 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.63■□□□□ 0.25
RB1P06400 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RB1P06400 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RB1P06400 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RB1P06400 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.62■□□□□ 0.25
RB1P06400 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.62■□□□□ 0.25
RB1P06400 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RB1P06400 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms