Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 LINC00528-201ENST00000600723 2160 ntBASIC15.06■□□□□ 0
MT-ND1P03886 AC104581.4-201ENST00000623126 3052 ntBASIC15.06■□□□□ 0
MT-ND1P03886 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.06■□□□□ 0
MT-ND1P03886 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
MT-ND1P03886 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.06■□□□□ 0
MT-ND1P03886 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.06■□□□□ 0
MT-ND1P03886 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.06■□□□□ 0
MT-ND1P03886 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
MT-ND1P03886 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.06■□□□□ 0
MT-ND1P03886 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
MT-ND1P03886 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.06■□□□□ 0
MT-ND1P03886 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.06■□□□□ 0
MT-ND1P03886 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.06■□□□□ 0
MT-ND1P03886 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.06■□□□□ 0
MT-ND1P03886 AC007292.2-201ENST00000593524 1812 ntBASIC15.06■□□□□ 0
MT-ND1P03886 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.06■□□□□ 0
MT-ND1P03886 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 AC011477.6-201ENST00000604980 1927 ntBASIC15.05■□□□□ 0
MT-ND1P03886 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
MT-ND1P03886 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.05■□□□□ 0
MT-ND1P03886 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.05■□□□□ 0
MT-ND1P03886 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
MT-ND1P03886 AC005089.1-201ENST00000619486 2241 ntBASIC15.05■□□□□ 0
MT-ND1P03886 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MT-ND1P03886 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.05■□□□□ 0
MT-ND1P03886 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MT-ND1P03886 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.05■□□□□ 0
MT-ND1P03886 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.05■□□□□ 0
MT-ND1P03886 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.05■□□□□ 0
MT-ND1P03886 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.05■□□□□ 0
MT-ND1P03886 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MT-ND1P03886 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MT-ND1P03886 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
MT-ND1P03886 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
MT-ND1P03886 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
MT-ND1P03886 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 RNU1-129P-201ENST00000384064 167 ntBASIC15.05■□□□□ -0
MT-ND1P03886 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
MT-ND1P03886 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.05■□□□□ -0
MT-ND1P03886 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.05■□□□□ -0
MT-ND1P03886 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.05■□□□□ -0
MT-ND1P03886 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.05■□□□□ -0
MT-ND1P03886 OR7E47P-204ENST00000575924 449 ntBASIC15.05■□□□□ -0
MT-ND1P03886 U1.21-201ENST00000580816 167 ntBASIC15.05■□□□□ -0
MT-ND1P03886 AC004790.2-201ENST00000623588 572 ntBASIC15.05■□□□□ -0
MT-ND1P03886 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.05■□□□□ -0
MT-ND1P03886 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
MT-ND1P03886 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
MT-ND1P03886 MIR600HG-201ENST00000449175 5984 ntBASIC15.05■□□□□ -0
MT-ND1P03886 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
MT-ND1P03886 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.05■□□□□ -0
MT-ND1P03886 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.05■□□□□ -0
MT-ND1P03886 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.05■□□□□ -0
MT-ND1P03886 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MT-ND1P03886 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.05■□□□□ -0
MT-ND1P03886 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.04■□□□□ -0
MT-ND1P03886 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.04■□□□□ -0
MT-ND1P03886 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.04■□□□□ -0
MT-ND1P03886 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
MT-ND1P03886 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.04■□□□□ -0
MT-ND1P03886 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.04■□□□□ -0
MT-ND1P03886 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms