Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HLA-AP01891 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.5□□□□□ -0.25
HLA-AP01891 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.5□□□□□ -0.25
HLA-AP01891 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
HLA-AP01891 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-AP01891 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HLA-AP01891 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HLA-AP01891 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
HLA-AP01891 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HLA-AP01891 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-AP01891 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.49□□□□□ -0.25
HLA-AP01891 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 FGD5P1-202ENST00000614866 2498 ntBASIC13.49□□□□□ -0.25
HLA-AP01891 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.49□□□□□ -0.25
HLA-AP01891 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
HLA-AP01891 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.49□□□□□ -0.25
HLA-AP01891 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
HLA-AP01891 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.49□□□□□ -0.25
HLA-AP01891 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
HLA-AP01891 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.49□□□□□ -0.25
HLA-AP01891 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.49□□□□□ -0.25
HLA-AP01891 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.49□□□□□ -0.25
HLA-AP01891 KRT16P4-201ENST00000453883 522 ntBASIC13.49□□□□□ -0.25
HLA-AP01891 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 AC091304.2-201ENST00000564639 760 ntBASIC13.49□□□□□ -0.25
HLA-AP01891 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.49□□□□□ -0.25
HLA-AP01891 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.49□□□□□ -0.25
HLA-AP01891 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.49□□□□□ -0.25
HLA-AP01891 AL121772.3-201ENST00000610840 674 ntBASIC13.49□□□□□ -0.25
HLA-AP01891 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.49□□□□□ -0.25
HLA-AP01891 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HLA-AP01891 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.49□□□□□ -0.25
HLA-AP01891 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.49□□□□□ -0.25
HLA-AP01891 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HLA-AP01891 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.49□□□□□ -0.25
HLA-AP01891 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HLA-AP01891 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
HLA-AP01891 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HLA-AP01891 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-AP01891 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HLA-AP01891 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-AP01891 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.48□□□□□ -0.25
HLA-AP01891 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-AP01891 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-AP01891 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-AP01891 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-AP01891 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-AP01891 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-AP01891 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-AP01891 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HLA-AP01891 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-AP01891 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.48□□□□□ -0.25
HLA-AP01891 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-AP01891 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-AP01891 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-AP01891 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-AP01891 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.48□□□□□ -0.25
HLA-AP01891 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-AP01891 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.48□□□□□ -0.25
HLA-AP01891 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.48□□□□□ -0.25
HLA-AP01891 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HLA-AP01891 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.48□□□□□ -0.25
HLA-AP01891 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.48□□□□□ -0.25
HLA-AP01891 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-AP01891 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-AP01891 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HLA-AP01891 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HLA-AP01891 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HLA-AP01891 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-AP01891 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-AP01891 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HLA-AP01891 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-AP01891 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-AP01891 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-AP01891 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-AP01891 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-AP01891 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-AP01891 PTENP1-202ENST00000532280 3996 ntBASIC13.47□□□□□ -0.25
HLA-AP01891 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-AP01891 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms