Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
IFNA1P01562 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.63□□□□□ -0.39
IFNA1P01562 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
IFNA1P01562 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.63□□□□□ -0.39
IFNA1P01562 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC12.63□□□□□ -0.39
IFNA1P01562 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.63□□□□□ -0.39
IFNA1P01562 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.63□□□□□ -0.39
IFNA1P01562 AC011467.2-201ENST00000598425 242 ntBASIC12.63□□□□□ -0.39
IFNA1P01562 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC12.63□□□□□ -0.39
IFNA1P01562 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
IFNA1P01562 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.63□□□□□ -0.39
IFNA1P01562 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.63□□□□□ -0.39
IFNA1P01562 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
IFNA1P01562 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
IFNA1P01562 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 AC005252.3-201ENST00000623855 2258 ntBASIC12.63□□□□□ -0.39
IFNA1P01562 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IFNA1P01562 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.63□□□□□ -0.39
IFNA1P01562 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
IFNA1P01562 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.63□□□□□ -0.39
IFNA1P01562 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC12.62□□□□□ -0.39
IFNA1P01562 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.62□□□□□ -0.39
IFNA1P01562 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
IFNA1P01562 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
IFNA1P01562 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.62□□□□□ -0.39
IFNA1P01562 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
IFNA1P01562 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.62□□□□□ -0.39
IFNA1P01562 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.62□□□□□ -0.39
IFNA1P01562 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
IFNA1P01562 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.62□□□□□ -0.39
IFNA1P01562 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.62□□□□□ -0.39
IFNA1P01562 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
IFNA1P01562 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
IFNA1P01562 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.62□□□□□ -0.39
IFNA1P01562 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
IFNA1P01562 AL592071.1-201ENST00000611956 408 ntBASIC12.62□□□□□ -0.39
IFNA1P01562 AC124864.1-201ENST00000623408 392 ntBASIC12.62□□□□□ -0.39
IFNA1P01562 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
IFNA1P01562 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
IFNA1P01562 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.62□□□□□ -0.39
IFNA1P01562 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.62□□□□□ -0.39
IFNA1P01562 AL590787.1-201ENST00000568856 1315 ntBASIC12.62□□□□□ -0.39
IFNA1P01562 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
IFNA1P01562 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
IFNA1P01562 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.61□□□□□ -0.39
IFNA1P01562 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.61□□□□□ -0.39
IFNA1P01562 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 AC006504.5-208ENST00000588784 2401 ntBASIC12.61□□□□□ -0.39
IFNA1P01562 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.61□□□□□ -0.39
IFNA1P01562 PMPCAP1-201ENST00000508114 1576 ntBASIC12.61□□□□□ -0.39
IFNA1P01562 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.61□□□□□ -0.39
IFNA1P01562 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC12.61□□□□□ -0.39
IFNA1P01562 AC117489.1-201ENST00000625169 3217 ntBASIC12.61□□□□□ -0.39
IFNA1P01562 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms