Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GGPS1O95749 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.76■□□□□ 0.43
GGPS1O95749 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GGPS1O95749 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GGPS1O95749 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.76■□□□□ 0.43
GGPS1O95749 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.76■□□□□ 0.43
GGPS1O95749 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GGPS1O95749 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
GGPS1O95749 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GGPS1O95749 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.76■□□□□ 0.43
GGPS1O95749 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
GGPS1O95749 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.76■□□□□ 0.43
GGPS1O95749 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.76■□□□□ 0.43
GGPS1O95749 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.76■□□□□ 0.43
GGPS1O95749 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.76■□□□□ 0.43
GGPS1O95749 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GGPS1O95749 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.76■□□□□ 0.43
GGPS1O95749 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GGPS1O95749 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GGPS1O95749 BRI3BPP1-201ENST00000594224 787 ntBASIC17.76■□□□□ 0.43
GGPS1O95749 AC008735.3-201ENST00000596646 500 ntBASIC17.76■□□□□ 0.43
GGPS1O95749 RPSAP52-203ENST00000622976 1023 ntBASIC17.76■□□□□ 0.43
GGPS1O95749 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
GGPS1O95749 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.76■□□□□ 0.43
GGPS1O95749 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
GGPS1O95749 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.76■□□□□ 0.43
GGPS1O95749 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
GGPS1O95749 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GGPS1O95749 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.76■□□□□ 0.43
GGPS1O95749 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GGPS1O95749 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.76■□□□□ 0.43
GGPS1O95749 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GGPS1O95749 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
GGPS1O95749 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GGPS1O95749 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
GGPS1O95749 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.75■□□□□ 0.43
GGPS1O95749 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
GGPS1O95749 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GGPS1O95749 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GGPS1O95749 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GGPS1O95749 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.75■□□□□ 0.43
GGPS1O95749 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
GGPS1O95749 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GGPS1O95749 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.75■□□□□ 0.43
GGPS1O95749 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.75■□□□□ 0.43
GGPS1O95749 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GGPS1O95749 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
GGPS1O95749 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
GGPS1O95749 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.75■□□□□ 0.43
GGPS1O95749 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GGPS1O95749 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.75■□□□□ 0.43
GGPS1O95749 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GGPS1O95749 AC133539.2-201ENST00000604757 467 ntBASIC17.75■□□□□ 0.43
GGPS1O95749 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.75■□□□□ 0.43
GGPS1O95749 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.75■□□□□ 0.43
GGPS1O95749 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
GGPS1O95749 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
GGPS1O95749 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GGPS1O95749 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GGPS1O95749 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GGPS1O95749 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.75■□□□□ 0.43
GGPS1O95749 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GGPS1O95749 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GGPS1O95749 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.75■□□□□ 0.43
GGPS1O95749 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GGPS1O95749 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.75■□□□□ 0.43
GGPS1O95749 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.74■□□□□ 0.43
GGPS1O95749 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GGPS1O95749 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
GGPS1O95749 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.74■□□□□ 0.43
GGPS1O95749 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.74■□□□□ 0.43
GGPS1O95749 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GGPS1O95749 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
GGPS1O95749 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 KRT8P22-201ENST00000562317 1415 ntBASIC17.74■□□□□ 0.43
GGPS1O95749 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.74■□□□□ 0.43
GGPS1O95749 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.74■□□□□ 0.43
GGPS1O95749 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.74■□□□□ 0.43
GGPS1O95749 MIR1909-201ENST00000411312 80 ntBASIC17.74■□□□□ 0.43
GGPS1O95749 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.74■□□□□ 0.43
GGPS1O95749 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.74■□□□□ 0.43
GGPS1O95749 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.74■□□□□ 0.43
GGPS1O95749 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.74■□□□□ 0.43
GGPS1O95749 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.74■□□□□ 0.43
GGPS1O95749 AL359711.2-201ENST00000563105 872 ntBASIC17.74■□□□□ 0.43
GGPS1O95749 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GGPS1O95749 AL512343.1-201ENST00000605837 169 ntBASIC17.74■□□□□ 0.43
GGPS1O95749 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.74■□□□□ 0.43
GGPS1O95749 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
GGPS1O95749 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms