Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PHGDHO43175 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PHGDHO43175 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PHGDHO43175 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHGDHO43175 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
PHGDHO43175 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PHGDHO43175 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PHGDHO43175 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHGDHO43175 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.85■□□□□ 0.13
PHGDHO43175 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PHGDHO43175 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHGDHO43175 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PHGDHO43175 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHGDHO43175 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PHGDHO43175 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHGDHO43175 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHGDHO43175 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.85■□□□□ 0.13
PHGDHO43175 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PHGDHO43175 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHGDHO43175 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHGDHO43175 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PHGDHO43175 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.85■□□□□ 0.13
PHGDHO43175 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHGDHO43175 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.85■□□□□ 0.13
PHGDHO43175 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.85■□□□□ 0.13
PHGDHO43175 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.85■□□□□ 0.13
PHGDHO43175 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.85■□□□□ 0.13
PHGDHO43175 KRT8P48-201ENST00000515599 1220 ntBASIC15.85■□□□□ 0.13
PHGDHO43175 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.85■□□□□ 0.13
PHGDHO43175 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.85■□□□□ 0.13
PHGDHO43175 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.85■□□□□ 0.13
PHGDHO43175 AC243562.1-201ENST00000560672 389 ntBASIC15.85■□□□□ 0.13
PHGDHO43175 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.85■□□□□ 0.13
PHGDHO43175 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.85■□□□□ 0.13
PHGDHO43175 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.85■□□□□ 0.13
PHGDHO43175 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.85■□□□□ 0.13
PHGDHO43175 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PHGDHO43175 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PHGDHO43175 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.85■□□□□ 0.13
PHGDHO43175 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PHGDHO43175 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHGDHO43175 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHGDHO43175 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
PHGDHO43175 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.85■□□□□ 0.13
PHGDHO43175 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
PHGDHO43175 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PHGDHO43175 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.85■□□□□ 0.13
PHGDHO43175 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.85■□□□□ 0.13
PHGDHO43175 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHGDHO43175 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHGDHO43175 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.85■□□□□ 0.13
PHGDHO43175 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHGDHO43175 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHGDHO43175 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHGDHO43175 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.84■□□□□ 0.13
PHGDHO43175 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHGDHO43175 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PHGDHO43175 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.84■□□□□ 0.13
PHGDHO43175 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHGDHO43175 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PHGDHO43175 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHGDHO43175 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHGDHO43175 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHGDHO43175 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHGDHO43175 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
PHGDHO43175 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PHGDHO43175 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHGDHO43175 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PHGDHO43175 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.84■□□□□ 0.13
PHGDHO43175 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.84■□□□□ 0.13
PHGDHO43175 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PHGDHO43175 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PHGDHO43175 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHGDHO43175 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PHGDHO43175 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHGDHO43175 SPCS2P4-201ENST00000436160 681 ntBASIC15.84■□□□□ 0.13
PHGDHO43175 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PHGDHO43175 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PHGDHO43175 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHGDHO43175 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.84■□□□□ 0.13
PHGDHO43175 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.84■□□□□ 0.13
PHGDHO43175 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.84■□□□□ 0.13
PHGDHO43175 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.84■□□□□ 0.13
PHGDHO43175 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.84■□□□□ 0.13
PHGDHO43175 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.84■□□□□ 0.13
PHGDHO43175 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.84■□□□□ 0.13
PHGDHO43175 MIR4313-201ENST00000580760 101 ntBASIC15.84■□□□□ 0.13
PHGDHO43175 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.84■□□□□ 0.13
PHGDHO43175 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.84■□□□□ 0.13
PHGDHO43175 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHGDHO43175 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHGDHO43175 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHGDHO43175 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.84■□□□□ 0.13
PHGDHO43175 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.84■□□□□ 0.13
PHGDHO43175 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHGDHO43175 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.84■□□□□ 0.13
PHGDHO43175 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.84■□□□□ 0.13
PHGDHO43175 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHGDHO43175 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHGDHO43175 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms