Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 LCK-206ENST00000373564 2137 ntTSL 5 BASIC20.84■□□□□ 0.93
APAF1O14727 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
APAF1O14727 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC20.84■□□□□ 0.93
APAF1O14727 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC20.84■□□□□ 0.93
APAF1O14727 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.84■□□□□ 0.93
APAF1O14727 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
APAF1O14727 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
APAF1O14727 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
APAF1O14727 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
APAF1O14727 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.84■□□□□ 0.93
APAF1O14727 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APAF1O14727 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
APAF1O14727 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC20.84■□□□□ 0.93
APAF1O14727 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APAF1O14727 SLC9A7P1-201ENST00000554295 3311 ntBASIC20.84■□□□□ 0.93
APAF1O14727 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
APAF1O14727 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
APAF1O14727 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APAF1O14727 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
APAF1O14727 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
APAF1O14727 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.84■□□□□ 0.93
APAF1O14727 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.84■□□□□ 0.93
APAF1O14727 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.84■□□□□ 0.93
APAF1O14727 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.84■□□□□ 0.93
APAF1O14727 AC074044.1-201ENST00000609673 707 ntBASIC20.84■□□□□ 0.93
APAF1O14727 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APAF1O14727 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APAF1O14727 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
APAF1O14727 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.84■□□□□ 0.93
APAF1O14727 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APAF1O14727 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APAF1O14727 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
APAF1O14727 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
APAF1O14727 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC20.84■□□□□ 0.93
APAF1O14727 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
APAF1O14727 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
APAF1O14727 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APAF1O14727 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC20.84■□□□□ 0.93
APAF1O14727 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
APAF1O14727 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC20.83■□□□□ 0.93
APAF1O14727 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
APAF1O14727 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
APAF1O14727 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
APAF1O14727 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
APAF1O14727 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC20.83■□□□□ 0.93
APAF1O14727 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
APAF1O14727 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
APAF1O14727 SSR4P1-203ENST00000599569 2260 ntBASIC20.83■□□□□ 0.93
APAF1O14727 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC20.83■□□□□ 0.93
APAF1O14727 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
APAF1O14727 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
APAF1O14727 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
APAF1O14727 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
APAF1O14727 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
APAF1O14727 FAM8A3P-201ENST00000427218 844 ntBASIC20.83■□□□□ 0.93
APAF1O14727 AC114501.2-201ENST00000439631 535 ntBASIC20.83■□□□□ 0.93
APAF1O14727 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.83■□□□□ 0.93
APAF1O14727 AL589987.1-201ENST00000453380 819 ntBASIC20.83■□□□□ 0.93
APAF1O14727 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.83■□□□□ 0.93
APAF1O14727 AL512638.1-201ENST00000457493 794 ntBASIC20.83■□□□□ 0.93
APAF1O14727 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.83■□□□□ 0.93
APAF1O14727 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.83■□□□□ 0.93
APAF1O14727 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
APAF1O14727 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.83■□□□□ 0.93
APAF1O14727 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.83■□□□□ 0.93
APAF1O14727 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.83■□□□□ 0.93
APAF1O14727 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.83■□□□□ 0.93
APAF1O14727 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC20.83■□□□□ 0.93
APAF1O14727 BID-213ENST00000615414 2236 ntTSL 5 BASIC20.83■□□□□ 0.93
APAF1O14727 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC20.83■□□□□ 0.93
APAF1O14727 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC20.83■□□□□ 0.92
APAF1O14727 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
APAF1O14727 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC20.83■□□□□ 0.92
APAF1O14727 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC20.83■□□□□ 0.92
APAF1O14727 GSN-206ENST00000394353 2311 ntTSL 2 BASIC20.83■□□□□ 0.92
APAF1O14727 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC20.83■□□□□ 0.92
APAF1O14727 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.92
APAF1O14727 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.92
APAF1O14727 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
APAF1O14727 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
APAF1O14727 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
APAF1O14727 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
APAF1O14727 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC20.83■□□□□ 0.92
APAF1O14727 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC20.83■□□□□ 0.92
APAF1O14727 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
APAF1O14727 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
APAF1O14727 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
APAF1O14727 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC20.82■□□□□ 0.92
APAF1O14727 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
APAF1O14727 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
APAF1O14727 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
APAF1O14727 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
APAF1O14727 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
APAF1O14727 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC20.82■□□□□ 0.92
APAF1O14727 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.82■□□□□ 0.92
APAF1O14727 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
APAF1O14727 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
APAF1O14727 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
APAF1O14727 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.82■□□□□ 0.92
APAF1O14727 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms