Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
O00370 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.95■□□□□ 0.3
O00370 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.95■□□□□ 0.3
O00370 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.94■□□□□ 0.3
O00370 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.94■□□□□ 0.3
O00370 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.94■□□□□ 0.3
O00370 AC073347.1-201ENST00000421633 2643 ntBASIC16.94■□□□□ 0.3
O00370 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.94■□□□□ 0.3
O00370 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.94■□□□□ 0.3
O00370 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.94■□□□□ 0.3
O00370 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.94■□□□□ 0.3
O00370 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.94■□□□□ 0.3
O00370 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
O00370 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.93■□□□□ 0.3
O00370 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.93■□□□□ 0.3
O00370 AC022532.1-201ENST00000624563 1728 ntBASIC16.93■□□□□ 0.3
O00370 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.93■□□□□ 0.3
O00370 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
O00370 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
O00370 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.93■□□□□ 0.3
O00370 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
O00370 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
O00370 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.93■□□□□ 0.3
O00370 FO393414.2-201ENST00000405153 598 ntBASIC16.93■□□□□ 0.3
O00370 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 CYMP-203ENST00000474680 1263 ntBASIC16.93■□□□□ 0.3
O00370 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
O00370 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.93■□□□□ 0.3
O00370 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 AL390955.2-201ENST00000603032 514 ntBASIC16.93■□□□□ 0.3
O00370 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.93■□□□□ 0.3
O00370 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
O00370 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 AC013268.4-201ENST00000637413 2228 ntBASIC16.93■□□□□ 0.3
O00370 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
O00370 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
O00370 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.93■□□□□ 0.3
O00370 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.93■□□□□ 0.3
O00370 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.92■□□□□ 0.3
O00370 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
O00370 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.92■□□□□ 0.3
O00370 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
O00370 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
O00370 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
O00370 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
O00370 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
O00370 CICP13-201ENST00000422015 2789 ntBASIC16.92■□□□□ 0.3
O00370 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
O00370 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.92■□□□□ 0.3
O00370 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.92■□□□□ 0.3
O00370 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
O00370 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms