Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 PP12613-201ENST00000424958 2230 ntBASIC19.49■□□□□ 0.71
RGPD3A6NKT7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 BUD31-205ENST00000456893 512 ntTSL 5 BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 AC007718.1-201ENST00000621078 280 ntBASIC19.49■□□□□ 0.71
RGPD3A6NKT7 AC002472.3-201ENST00000640124 621 ntBASIC19.49■□□□□ 0.71
RGPD3A6NKT7 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RGPD3A6NKT7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 AL512430.1-201ENST00000392575 860 ntBASIC19.48■□□□□ 0.71
RGPD3A6NKT7 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 AC068880.1-201ENST00000507289 2297 ntBASIC19.48■□□□□ 0.71
RGPD3A6NKT7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RGPD3A6NKT7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 AL357563.1-201ENST00000404728 395 ntBASIC19.47■□□□□ 0.71
RGPD3A6NKT7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 HPGD-203ENST00000422112 805 ntTSL 2 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 PUDPP3-201ENST00000445368 636 ntBASIC19.47■□□□□ 0.71
RGPD3A6NKT7 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 ALG1L13P-202ENST00000519320 584 ntBASIC19.47■□□□□ 0.71
RGPD3A6NKT7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 RN7SL596P-201ENST00000582123 288 ntBASIC19.47■□□□□ 0.71
RGPD3A6NKT7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 FAU-202ENST00000434372 533 ntTSL 2 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 REEP5-205ENST00000504247 480 ntTSL 5 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC19.47■□□□□ 0.71
RGPD3A6NKT7 AC022616.1-201ENST00000518688 554 ntBASIC19.47■□□□□ 0.71
RGPD3A6NKT7 AL109837.1-201ENST00000603272 613 ntBASIC19.47■□□□□ 0.71
RGPD3A6NKT7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 AC090502.4-201ENST00000551714 1386 ntBASIC19.46■□□□□ 0.71
RGPD3A6NKT7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 AC005915.1-201ENST00000624912 2018 ntBASIC19.46■□□□□ 0.71
RGPD3A6NKT7 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 AC018892.3-201ENST00000623986 2499 ntBASIC19.46■□□□□ 0.71
RGPD3A6NKT7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 CHCHD2P9-201ENST00000461726 456 ntBASIC19.46■□□□□ 0.71
RGPD3A6NKT7 CDC23-208ENST00000505120 455 ntTSL 3 BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms