Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC23.11■■□□□ 1.29
HFM1A2PYH4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
HFM1A2PYH4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HFM1A2PYH4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
HFM1A2PYH4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC23.11■■□□□ 1.29
HFM1A2PYH4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
HFM1A2PYH4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
HFM1A2PYH4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
HFM1A2PYH4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC23.11■■□□□ 1.29
HFM1A2PYH4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
HFM1A2PYH4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HFM1A2PYH4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HFM1A2PYH4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC23.11■■□□□ 1.29
HFM1A2PYH4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HFM1A2PYH4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC23.11■■□□□ 1.29
HFM1A2PYH4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
HFM1A2PYH4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC23.1■■□□□ 1.29
HFM1A2PYH4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
HFM1A2PYH4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC23.1■■□□□ 1.29
HFM1A2PYH4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
HFM1A2PYH4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HFM1A2PYH4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HFM1A2PYH4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HFM1A2PYH4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HFM1A2PYH4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC23.1■■□□□ 1.29
HFM1A2PYH4 MIR1909-201ENST00000411312 80 ntBASIC23.1■■□□□ 1.29
HFM1A2PYH4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HFM1A2PYH4 KRT17P8-201ENST00000540749 863 ntBASIC23.1■■□□□ 1.29
HFM1A2PYH4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC23.1■■□□□ 1.29
HFM1A2PYH4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HFM1A2PYH4 AC009486.1-201ENST00000569860 813 ntBASIC23.1■■□□□ 1.29
HFM1A2PYH4 AC017083.2-201ENST00000608069 979 ntBASIC23.1■■□□□ 1.29
HFM1A2PYH4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
HFM1A2PYH4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC23.1■■□□□ 1.29
HFM1A2PYH4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HFM1A2PYH4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HFM1A2PYH4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HFM1A2PYH4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HFM1A2PYH4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
HFM1A2PYH4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
HFM1A2PYH4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
HFM1A2PYH4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC23.09■■□□□ 1.29
HFM1A2PYH4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC23.09■■□□□ 1.29
HFM1A2PYH4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HFM1A2PYH4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HFM1A2PYH4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC23.09■■□□□ 1.29
HFM1A2PYH4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HFM1A2PYH4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HFM1A2PYH4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HFM1A2PYH4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC23.09■■□□□ 1.29
HFM1A2PYH4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HFM1A2PYH4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC23.09■■□□□ 1.29
HFM1A2PYH4 AC093433.1-201ENST00000458048 571 ntBASIC23.09■■□□□ 1.29
HFM1A2PYH4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
HFM1A2PYH4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
HFM1A2PYH4 PTP4A1P2-201ENST00000546033 454 ntBASIC23.09■■□□□ 1.29
HFM1A2PYH4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC23.09■■□□□ 1.29
HFM1A2PYH4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC23.09■■□□□ 1.29
HFM1A2PYH4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC23.09■■□□□ 1.29
HFM1A2PYH4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
HFM1A2PYH4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
HFM1A2PYH4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
HFM1A2PYH4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HFM1A2PYH4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HFM1A2PYH4 TNRC18P3-201ENST00000441896 2691 ntBASIC23.09■■□□□ 1.29
HFM1A2PYH4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
HFM1A2PYH4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HFM1A2PYH4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
HFM1A2PYH4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HFM1A2PYH4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HFM1A2PYH4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
HFM1A2PYH4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC23.08■■□□□ 1.29
HFM1A2PYH4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC23.08■■□□□ 1.29
HFM1A2PYH4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
HFM1A2PYH4 GHSR-202ENST00000427970 912 ntBASIC23.08■■□□□ 1.29
HFM1A2PYH4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC23.08■■□□□ 1.29
HFM1A2PYH4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
HFM1A2PYH4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC23.08■■□□□ 1.29
HFM1A2PYH4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HFM1A2PYH4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC23.08■■□□□ 1.29
HFM1A2PYH4 AL512343.1-201ENST00000605837 169 ntBASIC23.08■■□□□ 1.29
HFM1A2PYH4 PRSS30P-206ENST00000641773 873 ntBASIC23.08■■□□□ 1.29
HFM1A2PYH4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HFM1A2PYH4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC23.08■■□□□ 1.29
HFM1A2PYH4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
HFM1A2PYH4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
HFM1A2PYH4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HFM1A2PYH4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HFM1A2PYH4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC23.08■■□□□ 1.29
HFM1A2PYH4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
HFM1A2PYH4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HFM1A2PYH4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
HFM1A2PYH4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
HFM1A2PYH4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HFM1A2PYH4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
HFM1A2PYH4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HFM1A2PYH4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
HFM1A2PYH4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
HFM1A2PYH4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
HFM1A2PYH4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms