Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 MRPL20P1-201ENST00000400819 433 ntBASIC13.86□□□□□ -0.19
SHISA3A0PJX4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 RPS2P1-201ENST00000434010 821 ntBASIC13.86□□□□□ -0.19
SHISA3A0PJX4 AC108073.2-201ENST00000464002 357 ntBASIC13.86□□□□□ -0.19
SHISA3A0PJX4 KRT18P31-201ENST00000506277 1292 ntBASIC13.86□□□□□ -0.19
SHISA3A0PJX4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 AL031432.2-201ENST00000566714 459 ntBASIC13.86□□□□□ -0.19
SHISA3A0PJX4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 AL928711.1-201ENST00000570165 459 ntBASIC13.86□□□□□ -0.19
SHISA3A0PJX4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 AL078644.1-201ENST00000609881 752 ntBASIC13.86□□□□□ -0.19
SHISA3A0PJX4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 AL928921.2-201ENST00000641325 2442 ntBASIC13.85□□□□□ -0.19
SHISA3A0PJX4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 KRT18P34-201ENST00000488218 1270 ntBASIC13.85□□□□□ -0.19
SHISA3A0PJX4 CXCL1P1-201ENST00000502804 216 ntBASIC13.85□□□□□ -0.19
SHISA3A0PJX4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 REXO1L6P-202ENST00000619970 1078 ntBASIC13.85□□□□□ -0.19
SHISA3A0PJX4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.85□□□□□ -0.19
SHISA3A0PJX4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms