Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 AL390755.1-201ENST00000623716 2027 ntBASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 HCG4B-203ENST00000450128 991 ntBASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 AC091951.1-201ENST00000512854 2465 ntBASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
AP4B1Q9Y6B7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 LINC01144-201ENST00000626198 1710 ntBASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 AC005840.4-201ENST00000541242 2494 ntBASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 MIR940-201ENST00000401276 94 ntBASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 AC007967.2-201ENST00000432613 625 ntBASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 OR7E47P-204ENST00000575924 449 ntBASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 AL671883.3-201ENST00000603274 991 ntBASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 PMS2P7-201ENST00000506558 1336 ntBASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms