Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 AP005117.1-202ENST00000581724 1908 ntBASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 AC010336.2-201ENST00000564226 506 ntBASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 SPDYE22P-201ENST00000582158 798 ntBASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 AL844908.2-201ENST00000609461 460 ntBASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAI2Q9Y5P3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 FER1L4-210ENST00000615531 5998 ntBASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 HNRNPUP1-201ENST00000554987 333 ntBASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms