Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 FOXO1B-201ENST00000504678 1527 ntBASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 AL589702.1-201ENST00000641229 1509 ntBASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 RNA5SP410-201ENST00000516285 106 ntBASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 AC073389.1-201ENST00000595595 795 ntBASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 AL359881.2-201ENST00000602973 570 ntBASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
FNDC3AQ9Y2H6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 SPTSSB-204ENST00000617024 1292 ntBASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FNDC3AQ9Y2H6 CYP2T1P-202ENST00000641596 2535 ntBASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms