Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COPS3Q9UNS2 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 AL137784.3-201ENST00000623858 2288 ntBASIC14.24□□□□□ -0.13
COPS3Q9UNS2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 PRYP6-201ENST00000514804 343 ntBASIC14.24□□□□□ -0.13
COPS3Q9UNS2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 AC018845.2-201ENST00000568326 409 ntBASIC14.24□□□□□ -0.13
COPS3Q9UNS2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
COPS3Q9UNS2 AC025580.3-201ENST00000617932 1424 ntBASIC14.24□□□□□ -0.13
COPS3Q9UNS2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 AC018892.3-201ENST00000623986 2499 ntBASIC14.23□□□□□ -0.13
COPS3Q9UNS2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 AC004870.1-201ENST00000315132 882 ntBASIC14.23□□□□□ -0.13
COPS3Q9UNS2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 AC112693.3-201ENST00000624819 1983 ntBASIC14.23□□□□□ -0.13
COPS3Q9UNS2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms