Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXD3Q9UJU5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 AC099568.2-201ENST00000609194 695 ntBASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 AL008721.1-201ENST00000609964 604 ntBASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 AC007950.2-201ENST00000615045 2347 ntBASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXD3Q9UJU5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
FOXD3Q9UJU5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
FOXD3Q9UJU5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.21□□□□□ -0.14
FOXD3Q9UJU5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
FOXD3Q9UJU5 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.21□□□□□ -0.14
FOXD3Q9UJU5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.21□□□□□ -0.14
FOXD3Q9UJU5 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
FOXD3Q9UJU5 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
FOXD3Q9UJU5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
FOXD3Q9UJU5 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
FOXD3Q9UJU5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 AP005117.1-202ENST00000581724 1908 ntBASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 FO393414.2-201ENST00000405153 598 ntBASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 RN7SL752P-201ENST00000463779 287 ntBASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 AC044860.1-202ENST00000559481 777 ntBASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms