Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
UBQLN2Q9UHD9 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBQLN2Q9UHD9 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBQLN2Q9UHD9 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
UBQLN2Q9UHD9 AC140479.7-201ENST00000636301 2332 ntBASIC13.52□□□□□ -0.24
UBQLN2Q9UHD9 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBQLN2Q9UHD9 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBQLN2Q9UHD9 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBQLN2Q9UHD9 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.52□□□□□ -0.24
UBQLN2Q9UHD9 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBQLN2Q9UHD9 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBQLN2Q9UHD9 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBQLN2Q9UHD9 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
UBQLN2Q9UHD9 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBQLN2Q9UHD9 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 AC092119.3-201ENST00000612618 583 ntBASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 KRT18P1-202ENST00000452408 1331 ntBASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBQLN2Q9UHD9 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 AL928921.2-201ENST00000641325 2442 ntBASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 AC016734.2-201ENST00000624325 1377 ntBASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 TSPY12P-201ENST00000421279 868 ntBASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 POU5F1P6-201ENST00000466990 990 ntBASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 AC113404.2-201ENST00000507884 177 ntBASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 IGHV3-52-201ENST00000519770 353 ntBASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 AC124864.1-201ENST00000623408 392 ntBASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
UBQLN2Q9UHD9 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms