Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 KRT18P64-201ENST00000434946 1219 ntBASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 AC004461.2-201ENST00000629517 803 ntBASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 AC127383.1-201ENST00000444697 1800 ntBASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.3■□□□□ 0.68
ECHDC1Q9NTX5 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 AC020658.6-201ENST00000623564 1870 ntBASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 AC004840.1-201ENST00000636359 365 ntBASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 AF228730.6-201ENST00000641497 218 ntBASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 AC084121.3-201ENST00000641716 218 ntBASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 CICP6-201ENST00000457191 2729 ntBASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.29■□□□□ 0.68
ECHDC1Q9NTX5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 AC009090.5-201ENST00000624886 2285 ntBASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 SLED1-202ENST00000512051 380 ntBASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 AL355385.1-201ENST00000606123 409 ntBASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms