Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 AL162727.3-201ENST00000635661 2787 ntBASIC13.64□□□□□ -0.23
GCM1Q9NP62 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 MIR943-201ENST00000401286 94 ntBASIC13.64□□□□□ -0.23
GCM1Q9NP62 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.64□□□□□ -0.23
GCM1Q9NP62 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.64□□□□□ -0.23
GCM1Q9NP62 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
GCM1Q9NP62 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.64□□□□□ -0.23
GCM1Q9NP62 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 LINC02199-201ENST00000506655 2702 ntBASIC13.63□□□□□ -0.23
GCM1Q9NP62 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 PCDHA3-202ENST00000532566 4594 ntBASIC13.63□□□□□ -0.23
GCM1Q9NP62 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 AC068418.2-201ENST00000577309 3703 ntBASIC13.63□□□□□ -0.23
GCM1Q9NP62 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 MIR648-201ENST00000385046 94 ntBASIC13.63□□□□□ -0.23
GCM1Q9NP62 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 HAUS4P1-201ENST00000406739 1145 ntBASIC13.63□□□□□ -0.23
GCM1Q9NP62 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 AL158211.3-201ENST00000607385 239 ntBASIC13.63□□□□□ -0.23
GCM1Q9NP62 AL133215.2-201ENST00000609242 977 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms