Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 AC092364.2-201ENST00000596710 2692 ntBASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 AL035633.1-201ENST00000406139 838 ntBASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 COX20P2-201ENST00000452636 358 ntBASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 BNIP3P1-202ENST00000550043 1585 ntBASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF304Q9HCX3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 MIR648-201ENST00000385046 94 ntBASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 AC190387.1-201ENST00000551683 408 ntBASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF304Q9HCX3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms