Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 AL109954.1-202ENST00000564051 2148 ntBASIC15.19■□□□□ 0.02
BRF2Q9HAW0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 SPDYE7P-202ENST00000420373 878 ntBASIC15.19■□□□□ 0.02
BRF2Q9HAW0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 RN7SL828P-201ENST00000607615 303 ntBASIC15.19■□□□□ 0.02
BRF2Q9HAW0 AL133215.2-201ENST00000609242 977 ntBASIC15.19■□□□□ 0.02
BRF2Q9HAW0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
BRF2Q9HAW0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 AC006486.2-201ENST00000624246 2199 ntBASIC15.18■□□□□ 0.02
BRF2Q9HAW0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 AP006288.1-201ENST00000446065 395 ntBASIC15.18■□□□□ 0.02
BRF2Q9HAW0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 KRT8P12-202ENST00000472924 1397 ntBASIC15.18■□□□□ 0.02
BRF2Q9HAW0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 AC006058.4-201ENST00000624016 1670 ntBASIC15.18■□□□□ 0.02
BRF2Q9HAW0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms