Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 SDCCAG3P2-201ENST00000326105 1023 ntBASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 AL645937.2-201ENST00000396808 931 ntBASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 GGCT-203ENST00000409144 836 ntTSL 2 BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 NKAIN1P1-201ENST00000435754 582 ntBASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 SERPINA13P-202ENST00000478994 924 ntBASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 IMP3P2-201ENST00000489760 475 ntBASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 AC044849.1-201ENST00000519737 1188 ntBASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 AC097724.1-201ENST00000609581 426 ntBASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 KRT8P14-201ENST00000414254 1442 ntBASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CNTNAP4Q9C0A0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNTNAP4Q9C0A0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNTNAP4Q9C0A0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNTNAP4Q9C0A0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CNTNAP4Q9C0A0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CNTNAP4Q9C0A0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CNTNAP4Q9C0A0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 CYP46A4P-201ENST00000414953 267 ntBASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 HINT2P1-201ENST00000419438 481 ntBASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 FAM8A4P-201ENST00000435433 1213 ntBASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 COX5BP1-201ENST00000507622 393 ntBASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 NCK2-206ENST00000522586 490 ntTSL 5 BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 AP003171.2-201ENST00000528208 925 ntBASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 PPY2P-201ENST00000582808 702 ntBASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 NAT9-224ENST00000583757 583 ntTSL 3 BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 LRRC59-203ENST00000576448 1531 ntBASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CNTNAP4Q9C0A0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 AC106820.2-201ENST00000563775 3264 ntBASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 RN7SL713P-201ENST00000582127 302 ntBASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 AC073413.1-201ENST00000603927 732 ntBASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms