Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 PABPC1P11-201ENST00000428966 2007 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 ATP9B-203ENST00000458297 1507 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 JAML-211ENST00000533261 1508 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 AC139700.1-201ENST00000605810 1540 ntBASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-3Q9BYR6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 RPS2P45-201ENST00000469997 2057 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AC114546.3-201ENST00000623582 1734 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AP001020.2-201ENST00000581712 1605 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 MPHOSPH6-201ENST00000258169 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 Y_RNA.138-201ENST00000363462 102 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 Y_RNA.459-201ENST00000384251 102 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 OOSP1-201ENST00000398992 1270 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 RPL5P18-201ENST00000406671 891 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AC009237.2-201ENST00000421358 284 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AC233728.2-201ENST00000425348 757 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AL022313.3-201ENST00000433970 405 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 RPL21P18-201ENST00000469899 480 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AC093909.1-201ENST00000504731 1122 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 OR5AM1P-201ENST00000532136 1032 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AC008055.1-201ENST00000547032 609 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AL359212.1-201ENST00000556608 614 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 MIR7515HG-229ENST00000589150 962 ntTSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 Z69720.1-201ENST00000601483 472 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AL159169.2-201ENST00000610061 1269 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 DIO1-215ENST00000610607 796 ntTSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC02371-201ENST00000613818 567 ntTSL 4 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AC092329.4-206ENST00000640517 561 ntTSL 4 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms