RNA–Protein interactions for RNA: ENST00000506041.2

LINC02060-201, Transcript of long intergenic non-protein coding RNA 2060, humanhuman

TSL 1 (best) BASIC

Gene LINC02060, Length 1,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02060-201ENST00000506041 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
LINC02060-201ENST00000506041 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
LINC02060-201ENST00000506041 SENP3Q9H4L4 574 aaPredicted RBP19.72■□□□□ 0.75
LINC02060-201ENST00000506041 PHF23Q9BUL5 403 aaPredicted RBP19.56■□□□□ 0.72
LINC02060-201ENST00000506041 FOXD1Q16676 465 aa18.31■□□□□ 0.52
LINC02060-201ENST00000506041 PLPPR3Q6T4P5 718 aa17.95■□□□□ 0.46
LINC02060-201ENST00000506041 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
LINC02060-201ENST00000506041 ADRA2BP18089 450 aa17.29■□□□□ 0.36
LINC02060-201ENST00000506041 PIAS4Q8N2W9 510 aaPredicted RBP17.18■□□□□ 0.34
LINC02060-201ENST00000506041 MSH5O43196 834 aa17.04■□□□□ 0.32
LINC02060-201ENST00000506041 POTEDQ86YR6 584 aa16.08■□□□□ 0.16
LINC02060-201ENST00000506041 SCAF1Q9H7N4 1312 aaKnown RBP15.86■□□□□ 0.13
LINC02060-201ENST00000506041 MAPK8IP2Q13387 824 aaPredicted RBP15.77■□□□□ 0.12
LINC02060-201ENST00000506041 PPP4R3CPQ6ZMV5 832 aa15.76■□□□□ 0.11
LINC02060-201ENST00000506041 DMRT2Q9Y5R5 561 aa15.68■□□□□ 0.1
LINC02060-201ENST00000506041 CNKSR2Q8WXI2 1034 aa15.41■□□□□ 0.06
LINC02060-201ENST00000506041 NCBP3Q53F19 620 aaKnown RBP15.25■□□□□ 0.03
LINC02060-201ENST00000506041 HOXD11P31277 338 aaPredicted RBP15.25■□□□□ 0.03
LINC02060-201ENST00000506041 RNF216Q9NWF9 866 aaPredicted RBP15.2■□□□□ 0.02
LINC02060-201ENST00000506041 NPM3O75607 178 aaKnown RBP15.03■□□□□ -0
LINC02060-201ENST00000506041 KCNA4P22459 653 aa15□□□□□ -0.01
LINC02060-201ENST00000506041 DCAF8L1A6NGE4 600 aa14.92□□□□□ -0.02
LINC02060-201ENST00000506041 DNAJC5BQ9UF47 199 aa14.75□□□□□ -0.05
LINC02060-201ENST00000506041 RNF39Q9H2S5 420 aa14.57□□□□□ -0.08
LINC02060-201ENST00000506041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.46□□□□□ -0.09
LINC02060-201ENST00000506041 C1QBPQ07021 282 aaKnown RBP14.39□□□□□ -0.11
LINC02060-201ENST00000506041 CACNB1Q02641 598 aaPredicted RBP14.37□□□□□ -0.11
LINC02060-201ENST00000506041 SLC4A2P04920 1241 aa14.28□□□□□ -0.12
LINC02060-201ENST00000506041 U3KPZ7 1027 aaPredicted RBP14.23□□□□□ -0.13
LINC02060-201ENST00000506041 SLC4A1APQ9BWU0 796 aaKnown RBP14.22□□□□□ -0.13
LINC02060-201ENST00000506041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
LINC02060-201ENST00000506041 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
LINC02060-201ENST00000506041 FOXD4L1Q9NU39 408 aa13.93□□□□□ -0.18
LINC02060-201ENST00000506041 MYCNP04198 464 aaPredicted RBP13.9□□□□□ -0.18
LINC02060-201ENST00000506041 SPINK5Q9NQ38 1064 aaPredicted RBP13.9□□□□□ -0.19
LINC02060-201ENST00000506041 APLP2Q06481 763 aa13.88□□□□□ -0.19
LINC02060-201ENST00000506041 SAMD1Q6SPF0 538 aaPredicted RBP13.88□□□□□ -0.19
LINC02060-201ENST00000506041 CAPN15O75808 1086 aa13.84□□□□□ -0.19
LINC02060-201ENST00000506041 ZBTB22O15209 634 aa13.81□□□□□ -0.2
LINC02060-201ENST00000506041 DSG3P32926 999 aa13.74□□□□□ -0.21
LINC02060-201ENST00000506041 ZNF219Q9P2Y4 722 aaPredicted RBP13.73□□□□□ -0.21
LINC02060-201ENST00000506041 TRHP20396 242 aaPredicted RBP13.68□□□□□ -0.22
LINC02060-201ENST00000506041 ABCB7O75027 752 aa13.53□□□□□ -0.24
LINC02060-201ENST00000506041 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.25
LINC02060-201ENST00000506041 ATXN8OSP0DMR3 200 aa13.5□□□□□ -0.25
LINC02060-201ENST00000506041 CSRNP3Q8WYN3 585 aa13.45□□□□□ -0.26
LINC02060-201ENST00000506041 POLA2Q14181 598 aa13.42□□□□□ -0.26
LINC02060-201ENST00000506041 EHMT2Q96KQ7 1210 aa13.39□□□□□ -0.27
LINC02060-201ENST00000506041 ZBTB12Q9Y330 459 aaPredicted RBP13.22□□□□□ -0.29
LINC02060-201ENST00000506041 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
LINC02060-201ENST00000506041 FBLN2P98095 1184 aa12.99□□□□□ -0.33
LINC02060-201ENST00000506041 OSCARQ8IYS5 282 aa12.99□□□□□ -0.33
LINC02060-201ENST00000506041 MKRN4PQ13434 485 aaPredicted RBP12.95□□□□□ -0.34
LINC02060-201ENST00000506041 AKT1S1Q96B36 256 aa12.88□□□□□ -0.35
LINC02060-201ENST00000506041 SPDYE2BA6NHP3 402 aa12.83□□□□□ -0.36
LINC02060-201ENST00000506041 SPDYE6P0CI01 402 aa12.83□□□□□ -0.36
LINC02060-201ENST00000506041 SPDYE2Q495Y8 402 aa12.83□□□□□ -0.36
LINC02060-201ENST00000506041 REM2Q8IYK8 340 aaPredicted RBP12.73□□□□□ -0.37
LINC02060-201ENST00000506041 SSUH2Q9Y2M2 353 aa12.7□□□□□ -0.38
LINC02060-201ENST00000506041 CHRDL2Q6WN34 429 aa12.68□□□□□ -0.38
LINC02060-201ENST00000506041 ZNF692Q9BU19 519 aaPredicted RBP12.68□□□□□ -0.38
LINC02060-201ENST00000506041 POTEHQ6S545 545 aa12.66□□□□□ -0.38
LINC02060-201ENST00000506041 PITPNM1O00562 1244 aa12.59□□□□□ -0.39
LINC02060-201ENST00000506041 SPDYE1Q8NFV5 336 aaPredicted RBP12.51□□□□□ -0.41
LINC02060-201ENST00000506041 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
LINC02060-201ENST00000506041 SPDYE4A6NLX3 237 aa12.48□□□□□ -0.41
LINC02060-201ENST00000506041 FXR2P51116 673 aaKnown RBP eCLIP12.44□□□□□ -0.42
LINC02060-201ENST00000506041 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
LINC02060-201ENST00000506041 CLEC11AQ9Y240 323 aa12.41□□□□□ -0.42
LINC02060-201ENST00000506041 SLC24A1O60721 1099 aa12.3□□□□□ -0.44
LINC02060-201ENST00000506041 PROM2Q8N271 834 aa12.29□□□□□ -0.44
LINC02060-201ENST00000506041 PRR29P0C7W0 189 aa12.29□□□□□ -0.44
LINC02060-201ENST00000506041 STAG3Q9UJ98 1225 aa12.26□□□□□ -0.45
LINC02060-201ENST00000506041 PRKAR2AP13861 404 aaKnown RBP12.26□□□□□ -0.45
LINC02060-201ENST00000506041 FKBP8Q14318 412 aa12.15□□□□□ -0.46
LINC02060-201ENST00000506041 CHADLQ6NUI6 762 aa12.15□□□□□ -0.46
LINC02060-201ENST00000506041 HAX1O00165 279 aa12.1□□□□□ -0.47
LINC02060-201ENST00000506041 CREBZFQ9NS37 354 aa12.08□□□□□ -0.48
LINC02060-201ENST00000506041 FARP1Q9Y4F1 1045 aaPredicted RBP12.05□□□□□ -0.48
LINC02060-201ENST00000506041 C19orf67A6NJJ6 358 aa12.03□□□□□ -0.48
LINC02060-201ENST00000506041 SP7Q8TDD2 431 aaPredicted RBP12.02□□□□□ -0.49
LINC02060-201ENST00000506041 EVX2Q03828 476 aa11.99□□□□□ -0.49
LINC02060-201ENST00000506041 MNX1P50219 401 aaPredicted RBP11.93□□□□□ -0.5
LINC02060-201ENST00000506041 CD44P16070 742 aaKnown RBP11.89□□□□□ -0.51
LINC02060-201ENST00000506041 NPM1P06748 294 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC02060-201ENST00000506041 FBXO3Q9UK99 471 aa11.85□□□□□ -0.51
LINC02060-201ENST00000506041 MIER1Q8N108 512 aa11.84□□□□□ -0.51
LINC02060-201ENST00000506041 PLEKHG5O94827 1062 aa11.82□□□□□ -0.52
LINC02060-201ENST00000506041 PLCD3Q8N3E9 789 aa11.78□□□□□ -0.52
LINC02060-201ENST00000506041 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
LINC02060-201ENST00000506041 ZRANB1Q9UGI0 708 aa11.75□□□□□ -0.53
LINC02060-201ENST00000506041 GABBR2O75899 941 aa11.75□□□□□ -0.53
LINC02060-201ENST00000506041 PAK3O75914 559 aaPredicted RBP11.74□□□□□ -0.53
LINC02060-201ENST00000506041 CLCN6P51797 869 aa11.74□□□□□ -0.53
LINC02060-201ENST00000506041 ZBTB47Q9UFB7 747 aaPredicted RBP11.73□□□□□ -0.53
LINC02060-201ENST00000506041 VASPP50552 380 aaPredicted RBP11.69□□□□□ -0.54
LINC02060-201ENST00000506041 RASEFQ8IZ41 740 aa11.63□□□□□ -0.55
LINC02060-201ENST00000506041 NUBP1P53384 320 aa11.62□□□□□ -0.55
LINC02060-201ENST00000506041 PHF12Q96QT6 1004 aa11.62□□□□□ -0.55
LINC02060-201ENST00000506041 TSPYL2Q9H2G4 693 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms