Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AC097359.3-201ENST00000603982 1210 ntBASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AL391069.4-201ENST00000609583 481 ntBASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AC074044.1-201ENST00000609673 707 ntBASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 BTBD7P1-201ENST00000447253 1453 ntBASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-3Q9BYR4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms