Protein–RNA interactions for Protein: Q9BS92

NIPSNAP3B, Protein NipSnap homolog 3B, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3BQ9BS92 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NIPSNAP3BQ9BS92 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.82□□□□□ -0.36
NIPSNAP3BQ9BS92 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 MINOS1P3-201ENST00000457048 203 ntBASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 AL353801.3-201ENST00000609898 542 ntBASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NIPSNAP3BQ9BS92 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 KRT17P6-201ENST00000453795 1220 ntBASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 DUX4L17-201ENST00000557360 1267 ntBASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 CLEC4GP1-201ENST00000596555 870 ntBASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NIPSNAP3BQ9BS92 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms