Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB40CQ96S21 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB40CQ96S21 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB40CQ96S21 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB40CQ96S21 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB40CQ96S21 TSPY19P-201ENST00000418461 509 ntBASIC12.96□□□□□ -0.33
RAB40CQ96S21 TSPY18P-201ENST00000441642 509 ntBASIC12.96□□□□□ -0.33
RAB40CQ96S21 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.96□□□□□ -0.33
RAB40CQ96S21 RPS15P9-201ENST00000494093 319 ntBASIC12.96□□□□□ -0.33
RAB40CQ96S21 KRT18P31-201ENST00000506277 1292 ntBASIC12.96□□□□□ -0.33
RAB40CQ96S21 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.96□□□□□ -0.33
RAB40CQ96S21 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.96□□□□□ -0.33
RAB40CQ96S21 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.96□□□□□ -0.33
RAB40CQ96S21 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.96□□□□□ -0.33
RAB40CQ96S21 MIR4515-201ENST00000584082 81 ntBASIC12.96□□□□□ -0.33
RAB40CQ96S21 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
RAB40CQ96S21 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB40CQ96S21 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
RAB40CQ96S21 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB40CQ96S21 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB40CQ96S21 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB40CQ96S21 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.96□□□□□ -0.34
RAB40CQ96S21 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.96□□□□□ -0.34
RAB40CQ96S21 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB40CQ96S21 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
RAB40CQ96S21 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB40CQ96S21 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB40CQ96S21 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB40CQ96S21 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB40CQ96S21 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RAB40CQ96S21 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
RAB40CQ96S21 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
RAB40CQ96S21 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB40CQ96S21 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.96□□□□□ -0.34
RAB40CQ96S21 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.96□□□□□ -0.34
RAB40CQ96S21 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB40CQ96S21 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 AL031055.1-201ENST00000606362 631 ntBASIC12.95□□□□□ -0.34
RAB40CQ96S21 AL732292.2-201ENST00000609649 430 ntBASIC12.95□□□□□ -0.34
RAB40CQ96S21 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 AC007191.1-201ENST00000623179 2995 ntBASIC12.95□□□□□ -0.34
RAB40CQ96S21 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB40CQ96S21 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB40CQ96S21 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RAB40CQ96S21 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.94□□□□□ -0.34
RAB40CQ96S21 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB40CQ96S21 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB40CQ96S21 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB40CQ96S21 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB40CQ96S21 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RAB40CQ96S21 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB40CQ96S21 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB40CQ96S21 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB40CQ96S21 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms