Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TUBGCP6Q96RT7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBGCP6Q96RT7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC20.05■□□□□ 0.8
TUBGCP6Q96RT7 AC005622.1-201ENST00000636801 1703 ntBASIC20.05■□□□□ 0.8
TUBGCP6Q96RT7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TUBGCP6Q96RT7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TUBGCP6Q96RT7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 FGFR3P5-201ENST00000564496 886 ntBASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 RPL17P11-201ENST00000417593 544 ntBASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 CFL1-214ENST00000534769 758 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 ECM1P1-201ENST00000604092 1279 ntBASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
TUBGCP6Q96RT7 PCDHA1-201ENST00000378133 2726 ntBASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 BNIP3P1-202ENST00000550043 1585 ntBASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 AC136604.1-201ENST00000418535 575 ntBASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 AC044849.1-201ENST00000519737 1188 ntBASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 AP003419.4-201ENST00000616071 517 ntBASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBGCP6Q96RT7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 AC007274.2-201ENST00000421675 662 ntBASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 AP001582.1-201ENST00000525856 295 ntBASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 RERG-205ENST00000537647 935 ntTSL 2 BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 AC243562.2-201ENST00000561247 970 ntBASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.02■□□□□ 0.8
TUBGCP6Q96RT7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TUBGCP6Q96RT7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TUBGCP6Q96RT7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TUBGCP6Q96RT7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
TUBGCP6Q96RT7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC20.02■□□□□ 0.79
TUBGCP6Q96RT7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TUBGCP6Q96RT7 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TUBGCP6Q96RT7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TUBGCP6Q96RT7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TUBGCP6Q96RT7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TUBGCP6Q96RT7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC20.02■□□□□ 0.79
TUBGCP6Q96RT7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC20.02■□□□□ 0.79
TUBGCP6Q96RT7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC20.02■□□□□ 0.79
TUBGCP6Q96RT7 AC138649.2-201ENST00000615886 705 ntBASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms