Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.14■□□□□ 0.01
BBS4Q96RK4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BBS4Q96RK4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS4Q96RK4 AC084121.4-201ENST00000641598 221 ntBASIC15.14■□□□□ 0.01
BBS4Q96RK4 AF228730.8-201ENST00000642140 221 ntBASIC15.14■□□□□ 0.01
BBS4Q96RK4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS4Q96RK4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS4Q96RK4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.14■□□□□ 0.01
BBS4Q96RK4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.13■□□□□ 0.01
BBS4Q96RK4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 AC004987.2-201ENST00000395959 1148 ntBASIC15.13■□□□□ 0.01
BBS4Q96RK4 AC004461.1-201ENST00000412461 403 ntBASIC15.13■□□□□ 0.01
BBS4Q96RK4 AC211486.1-202ENST00000416371 468 ntBASIC15.13■□□□□ 0.01
BBS4Q96RK4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 AC211476.1-201ENST00000503899 468 ntBASIC15.13■□□□□ 0.01
BBS4Q96RK4 AP000344.2-201ENST00000512987 629 ntBASIC15.13■□□□□ 0.01
BBS4Q96RK4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 AC004835.2-201ENST00000603762 682 ntBASIC15.13■□□□□ 0.01
BBS4Q96RK4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.13■□□□□ 0.01
BBS4Q96RK4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS4Q96RK4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
BBS4Q96RK4 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.12■□□□□ 0.01
BBS4Q96RK4 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.12■□□□□ 0.01
BBS4Q96RK4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
BBS4Q96RK4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 AC097376.2-205ENST00000610159 5334 ntBASIC15.12■□□□□ 0.01
BBS4Q96RK4 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.12■□□□□ 0.01
BBS4Q96RK4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 AL627223.1-201ENST00000416693 442 ntBASIC15.12■□□□□ 0.01
BBS4Q96RK4 RPS8P6-201ENST00000426177 609 ntBASIC15.12■□□□□ 0.01
BBS4Q96RK4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.12■□□□□ 0.01
BBS4Q96RK4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.12■□□□□ 0.01
BBS4Q96RK4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.12■□□□□ 0.01
BBS4Q96RK4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.12■□□□□ 0.01
BBS4Q96RK4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.12■□□□□ 0.01
BBS4Q96RK4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms