Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 AC084018.2-201ENST00000613093 2607 ntBASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
UBE2E2Q96LR5 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 AC087499.6-201ENST00000411576 835 ntBASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 DFFBP1-201ENST00000433250 979 ntBASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 AL353779.1-201ENST00000434793 351 ntBASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
UBE2E2Q96LR5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 AC136604.1-201ENST00000418535 575 ntBASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 COX20P2-201ENST00000452636 358 ntBASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.3□□□□□ -0.44
UBE2E2Q96LR5 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms