Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 AC009090.5-201ENST00000624886 2285 ntBASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 AC132008.2-207ENST00000454517 770 ntBASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 AL353732.1-201ENST00000569618 1459 ntBASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.09■□□□□ 0.17
CHMP6Q96FZ7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.08■□□□□ 0.17
CHMP6Q96FZ7 AL137784.3-201ENST00000623858 2288 ntBASIC16.08■□□□□ 0.17
CHMP6Q96FZ7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.08■□□□□ 0.17
CHMP6Q96FZ7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.08■□□□□ 0.17
CHMP6Q96FZ7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.08■□□□□ 0.17
CHMP6Q96FZ7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 AC087163.2-201ENST00000457299 853 ntBASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 AC140479.7-201ENST00000636301 2332 ntBASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP6Q96FZ7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.07■□□□□ 0.16
CHMP6Q96FZ7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms