Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX21Q969T3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.82■□□□□ 0.6
SNX21Q969T3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.82■□□□□ 0.6
SNX21Q969T3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.82■□□□□ 0.6
SNX21Q969T3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX21Q969T3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX21Q969T3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX21Q969T3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX21Q969T3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX21Q969T3 WASH3P-207ENST00000560956 1394 ntBASIC18.81■□□□□ 0.6
SNX21Q969T3 FO538757.1-201ENST00000623083 1397 ntBASIC18.81■□□□□ 0.6
SNX21Q969T3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX21Q969T3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX21Q969T3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SNX21Q969T3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SNX21Q969T3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNX21Q969T3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX21Q969T3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SNX21Q969T3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX21Q969T3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX21Q969T3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX21Q969T3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX21Q969T3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX21Q969T3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX21Q969T3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX21Q969T3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX21Q969T3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SNX21Q969T3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
SNX21Q969T3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
SNX21Q969T3 RNA5SP415-201ENST00000517246 115 ntBASIC18.81■□□□□ 0.6
SNX21Q969T3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.81■□□□□ 0.6
SNX21Q969T3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX21Q969T3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SNX21Q969T3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SNX21Q969T3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
SNX21Q969T3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.81■□□□□ 0.6
SNX21Q969T3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX21Q969T3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.81■□□□□ 0.6
SNX21Q969T3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX21Q969T3 AC004877.2-201ENST00000623941 599 ntBASIC18.81■□□□□ 0.6
SNX21Q969T3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SNX21Q969T3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX21Q969T3 CICP14-201ENST00000629111 2732 ntBASIC18.81■□□□□ 0.6
SNX21Q969T3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX21Q969T3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX21Q969T3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SNX21Q969T3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX21Q969T3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SNX21Q969T3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX21Q969T3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX21Q969T3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX21Q969T3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX21Q969T3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SNX21Q969T3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX21Q969T3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SNX21Q969T3 IGHV3-22-201ENST00000520721 359 ntBASIC18.8■□□□□ 0.6
SNX21Q969T3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.8■□□□□ 0.6
SNX21Q969T3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.8■□□□□ 0.6
SNX21Q969T3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.8■□□□□ 0.6
SNX21Q969T3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SNX21Q969T3 KRT19P2-202ENST00000557173 1012 ntBASIC18.8■□□□□ 0.6
SNX21Q969T3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX21Q969T3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX21Q969T3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SNX21Q969T3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.8■□□□□ 0.6
SNX21Q969T3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX21Q969T3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX21Q969T3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SNX21Q969T3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 CYP4F24P-201ENST00000586049 1580 ntBASIC18.8■□□□□ 0.6
SNX21Q969T3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX21Q969T3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SNX21Q969T3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.8■□□□□ 0.6
SNX21Q969T3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX21Q969T3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SNX21Q969T3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX21Q969T3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.79■□□□□ 0.6
SNX21Q969T3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX21Q969T3 BCAR1-209ENST00000546196 1340 ntBASIC18.79■□□□□ 0.6
SNX21Q969T3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX21Q969T3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX21Q969T3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms