Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
CLDND2Q8NHS1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDND2Q8NHS1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDND2Q8NHS1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDND2Q8NHS1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CLDND2Q8NHS1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDND2Q8NHS1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDND2Q8NHS1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CLDND2Q8NHS1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.58□□□□□ -0.24
CLDND2Q8NHS1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDND2Q8NHS1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDND2Q8NHS1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDND2Q8NHS1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.58□□□□□ -0.24
CLDND2Q8NHS1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDND2Q8NHS1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CLDND2Q8NHS1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDND2Q8NHS1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDND2Q8NHS1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.58□□□□□ -0.24
CLDND2Q8NHS1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 ALOX12P2-203ENST00000570921 1945 ntBASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 AC005034.1-201ENST00000426657 489 ntBASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 CRB3P1-201ENST00000449338 276 ntBASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 AC009477.1-201ENST00000452936 217 ntBASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDND2Q8NHS1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDND2Q8NHS1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CLDND2Q8NHS1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CLDND2Q8NHS1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDND2Q8NHS1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDND2Q8NHS1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDND2Q8NHS1 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDND2Q8NHS1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDND2Q8NHS1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDND2Q8NHS1 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.56□□□□□ -0.24
CLDND2Q8NHS1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms