Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 NME2P1-201ENST00000426182 414 ntBASIC17.06■□□□□ 0.32
BEST2Q8NFU1 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 AC140912.1-201ENST00000577171 1054 ntBASIC17.06■□□□□ 0.32
BEST2Q8NFU1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 COX5BP8-201ENST00000416911 349 ntBASIC17.05■□□□□ 0.32
BEST2Q8NFU1 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BEST2Q8NFU1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 RN7SL692P-201ENST00000464677 288 ntBASIC17.04■□□□□ 0.32
BEST2Q8NFU1 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 RARRES2P5-201ENST00000564013 466 ntBASIC17.04■□□□□ 0.32
BEST2Q8NFU1 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 AC099568.2-201ENST00000609194 695 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms