Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 AP002414.2-201ENST00000591780 3365 ntBASIC18.55■□□□□ 0.56
CCDC82Q8N4S0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 AL512361.1-201ENST00000554200 418 ntBASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 AL355385.1-201ENST00000606123 409 ntBASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC82Q8N4S0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 AC092127.1-201ENST00000567093 3455 ntBASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 MIR770-201ENST00000390219 98 ntBASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 AC241585.1-201ENST00000433527 519 ntBASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCDC82Q8N4S0 AC092850.2-201ENST00000623821 2697 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms