Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB43Q86YS6 AC092171.3-201ENST00000610122 2651 ntBASIC15.28■□□□□ 0.04
RAB43Q86YS6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB43Q86YS6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
RAB43Q86YS6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB43Q86YS6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB43Q86YS6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB43Q86YS6 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB43Q86YS6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB43Q86YS6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB43Q86YS6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB43Q86YS6 AC126177.1-201ENST00000547829 2218 ntBASIC15.27■□□□□ 0.04
RAB43Q86YS6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB43Q86YS6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB43Q86YS6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB43Q86YS6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB43Q86YS6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB43Q86YS6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB43Q86YS6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 AC093724.1-201ENST00000448659 1027 ntBASIC15.27■□□□□ 0.04
RAB43Q86YS6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB43Q86YS6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB43Q86YS6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RAB43Q86YS6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB43Q86YS6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB43Q86YS6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RAB43Q86YS6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB43Q86YS6 AC067930.6-201ENST00000623257 4947 ntBASIC15.27■□□□□ 0.03
RAB43Q86YS6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 SERBP1P3-201ENST00000459980 809 ntBASIC15.26■□□□□ 0.03
RAB43Q86YS6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 AL079307.3-201ENST00000556114 283 ntBASIC15.26■□□□□ 0.03
RAB43Q86YS6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB43Q86YS6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB43Q86YS6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RAB43Q86YS6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB43Q86YS6 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms