Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHFQ7M4L6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHFQ7M4L6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 AC098831.1-202ENST00000438821 336 ntBASIC14.44□□□□□ -0.1
SHFQ7M4L6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 UNC93B6-202ENST00000528242 690 ntBASIC14.44□□□□□ -0.1
SHFQ7M4L6 AC109635.5-201ENST00000533593 962 ntBASIC14.44□□□□□ -0.1
SHFQ7M4L6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 AL365330.1-201ENST00000607459 531 ntBASIC14.44□□□□□ -0.1
SHFQ7M4L6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 AC007064.4-201ENST00000637740 555 ntBASIC14.44□□□□□ -0.1
SHFQ7M4L6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHFQ7M4L6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHFQ7M4L6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHFQ7M4L6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHFQ7M4L6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHFQ7M4L6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHFQ7M4L6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHFQ7M4L6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
SHFQ7M4L6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 AC112693.3-201ENST00000624819 1983 ntBASIC14.43□□□□□ -0.1
SHFQ7M4L6 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 AC079781.3-201ENST00000449110 356 ntBASIC14.43□□□□□ -0.1
SHFQ7M4L6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 AC096734.2-201ENST00000562054 433 ntBASIC14.43□□□□□ -0.1
SHFQ7M4L6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
SHFQ7M4L6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.43□□□□□ -0.1
SHFQ7M4L6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHFQ7M4L6 AC011477.6-201ENST00000604980 1927 ntBASIC14.43□□□□□ -0.1
SHFQ7M4L6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.42□□□□□ -0.1
SHFQ7M4L6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SHFQ7M4L6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms