Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HIST3H2AQ7L7L0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HIST3H2AQ7L7L0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HIST3H2AQ7L7L0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
HIST3H2AQ7L7L0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.58□□□□□ -0.07
HIST3H2AQ7L7L0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
HIST3H2AQ7L7L0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.58□□□□□ -0.07
HIST3H2AQ7L7L0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HIST3H2AQ7L7L0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 AL355306.1-201ENST00000415580 579 ntBASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 IGHV3-62-201ENST00000520057 340 ntBASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 AC073389.1-201ENST00000595595 795 ntBASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST3H2AQ7L7L0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 AC144831.1-201ENST00000573312 2656 ntBASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST3H2AQ7L7L0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 AC011477.6-201ENST00000604980 1927 ntBASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms