Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 KRT19P2-202ENST00000557173 1012 ntBASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SMARCD3Q6STE5 SBF1P1-201ENST00000444527 5631 ntBASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 AC087481.3-201ENST00000602886 1894 ntBASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 AC134407.2-201ENST00000625089 1978 ntBASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 GPX1P2-201ENST00000429271 606 ntBASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 SLC25A6P4-201ENST00000586535 553 ntBASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 AC092127.1-201ENST00000567093 3455 ntBASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.57□□□□□ -0.08
SMARCD3Q6STE5 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms