Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 AC006449.6-201ENST00000612330 2296 ntBASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 KRT8P22-201ENST00000562317 1415 ntBASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 CROCCP4-201ENST00000457096 498 ntBASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 SNX29P1-201ENST00000548357 1007 ntBASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 AL359711.2-201ENST00000563105 872 ntBASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 AC133539.2-201ENST00000604757 467 ntBASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC62Q6P9F0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 AL139384.1-201ENST00000612143 3047 ntBASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 ACTG1P3-201ENST00000431775 1114 ntBASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 AL162726.2-201ENST00000438986 1017 ntBASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms