Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPIN4Q56A73 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPIN4Q56A73 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPIN4Q56A73 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPIN4Q56A73 AC004461.1-201ENST00000412461 403 ntBASIC15.2■□□□□ 0.02
SPIN4Q56A73 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 AC018529.1-201ENST00000613063 361 ntBASIC15.2■□□□□ 0.02
SPIN4Q56A73 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPIN4Q56A73 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPIN4Q56A73 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPIN4Q56A73 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPIN4Q56A73 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPIN4Q56A73 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPIN4Q56A73 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPIN4Q56A73 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPIN4Q56A73 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.2■□□□□ 0.02
SPIN4Q56A73 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPIN4Q56A73 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPIN4Q56A73 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SPIN4Q56A73 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SPIN4Q56A73 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.19■□□□□ 0.02
SPIN4Q56A73 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SPIN4Q56A73 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.19■□□□□ 0.02
SPIN4Q56A73 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SPIN4Q56A73 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.19■□□□□ 0.02
SPIN4Q56A73 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SPIN4Q56A73 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.19■□□□□ 0.02
SPIN4Q56A73 BX842568.4-201ENST00000421222 227 ntBASIC15.19■□□□□ 0.02
SPIN4Q56A73 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.19■□□□□ 0.02
SPIN4Q56A73 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.19■□□□□ 0.02
SPIN4Q56A73 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.19■□□□□ 0.02
SPIN4Q56A73 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 AC004835.2-201ENST00000603762 682 ntBASIC15.19■□□□□ 0.02
SPIN4Q56A73 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 AC068418.2-201ENST00000577309 3703 ntBASIC15.19■□□□□ 0.02
SPIN4Q56A73 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.19■□□□□ 0.02
SPIN4Q56A73 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SPIN4Q56A73 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPIN4Q56A73 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SPIN4Q56A73 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.18■□□□□ 0.02
SPIN4Q56A73 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPIN4Q56A73 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPIN4Q56A73 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SPIN4Q56A73 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.18■□□□□ 0.02
SPIN4Q56A73 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SPIN4Q56A73 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPIN4Q56A73 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPIN4Q56A73 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.18■□□□□ 0.02
SPIN4Q56A73 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.18■□□□□ 0.02
SPIN4Q56A73 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.18■□□□□ 0.02
SPIN4Q56A73 AP000347.1-202ENST00000435868 847 ntBASIC15.18■□□□□ 0.02
SPIN4Q56A73 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.18■□□□□ 0.02
SPIN4Q56A73 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SPIN4Q56A73 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.18■□□□□ 0.02
SPIN4Q56A73 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SPIN4Q56A73 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.18■□□□□ 0.02
SPIN4Q56A73 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPIN4Q56A73 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SPIN4Q56A73 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.18■□□□□ 0.02
SPIN4Q56A73 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.18■□□□□ 0.02
SPIN4Q56A73 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms