Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CNTNAP1P78357 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP1P78357 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.67■□□□□ 0.58
CNTNAP1P78357 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP1P78357 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP1P78357 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP1P78357 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP1P78357 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP1P78357 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.67■□□□□ 0.58
CNTNAP1P78357 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP1P78357 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP1P78357 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.67■□□□□ 0.58
CNTNAP1P78357 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP1P78357 RPL13AP19-201ENST00000434320 584 ntBASIC18.67■□□□□ 0.58
CNTNAP1P78357 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC18.67■□□□□ 0.58
CNTNAP1P78357 COX5BP1-201ENST00000507622 393 ntBASIC18.67■□□□□ 0.58
CNTNAP1P78357 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.67■□□□□ 0.58
CNTNAP1P78357 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.67■□□□□ 0.58
CNTNAP1P78357 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.67■□□□□ 0.58
CNTNAP1P78357 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP1P78357 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP1P78357 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP1P78357 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CNTNAP1P78357 AC138649.2-201ENST00000615886 705 ntBASIC18.67■□□□□ 0.58
CNTNAP1P78357 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.67■□□□□ 0.58
CNTNAP1P78357 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CNTNAP1P78357 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CNTNAP1P78357 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.67■□□□□ 0.58
CNTNAP1P78357 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.66■□□□□ 0.58
CNTNAP1P78357 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP1P78357 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP1P78357 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.66■□□□□ 0.58
CNTNAP1P78357 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CNTNAP1P78357 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP1P78357 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP1P78357 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP1P78357 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.66■□□□□ 0.58
CNTNAP1P78357 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP1P78357 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP1P78357 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP1P78357 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CNTNAP1P78357 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CNTNAP1P78357 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP1P78357 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.66■□□□□ 0.58
CNTNAP1P78357 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CNTNAP1P78357 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CNTNAP1P78357 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP1P78357 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CNTNAP1P78357 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.66■□□□□ 0.58
CNTNAP1P78357 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC18.66■□□□□ 0.58
CNTNAP1P78357 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.66■□□□□ 0.58
CNTNAP1P78357 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC18.66■□□□□ 0.58
CNTNAP1P78357 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.66■□□□□ 0.58
CNTNAP1P78357 AC015910.1-201ENST00000579400 975 ntBASIC18.66■□□□□ 0.58
CNTNAP1P78357 AC107373.2-201ENST00000607735 490 ntBASIC18.66■□□□□ 0.58
CNTNAP1P78357 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.66■□□□□ 0.58
CNTNAP1P78357 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.66■□□□□ 0.58
CNTNAP1P78357 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP1P78357 AGGF1P2-201ENST00000426656 2106 ntBASIC18.65■□□□□ 0.58
CNTNAP1P78357 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP1P78357 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP1P78357 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP1P78357 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CNTNAP1P78357 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP1P78357 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CNTNAP1P78357 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CNTNAP1P78357 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.65■□□□□ 0.58
CNTNAP1P78357 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CNTNAP1P78357 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.65■□□□□ 0.58
CNTNAP1P78357 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP1P78357 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP1P78357 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP1P78357 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CNTNAP1P78357 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP1P78357 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.65■□□□□ 0.58
CNTNAP1P78357 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.65■□□□□ 0.58
CNTNAP1P78357 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.65■□□□□ 0.58
CNTNAP1P78357 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP1P78357 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.65■□□□□ 0.58
CNTNAP1P78357 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP1P78357 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.65■□□□□ 0.58
CNTNAP1P78357 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP1P78357 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.65■□□□□ 0.58
CNTNAP1P78357 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CNTNAP1P78357 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CNTNAP1P78357 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP1P78357 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP1P78357 PGAM1P5-201ENST00000548011 764 ntBASIC18.65■□□□□ 0.58
CNTNAP1P78357 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.65■□□□□ 0.58
CNTNAP1P78357 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC18.65■□□□□ 0.58
CNTNAP1P78357 AL133499.1-201ENST00000596207 608 ntBASIC18.65■□□□□ 0.58
CNTNAP1P78357 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC18.65■□□□□ 0.58
CNTNAP1P78357 AP000346.4-201ENST00000614827 381 ntBASIC18.65■□□□□ 0.58
CNTNAP1P78357 MIR6756-201ENST00000616240 63 ntBASIC18.65■□□□□ 0.58
CNTNAP1P78357 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CNTNAP1P78357 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.65■□□□□ 0.58
CNTNAP1P78357 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP1P78357 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CNTNAP1P78357 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CNTNAP1P78357 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms