Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S1P61966 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.97■□□□□ 0.15
AP1S1P61966 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S1P61966 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S1P61966 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
AP1S1P61966 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S1P61966 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S1P61966 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
AP1S1P61966 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.97■□□□□ 0.15
AP1S1P61966 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S1P61966 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S1P61966 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.97■□□□□ 0.15
AP1S1P61966 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S1P61966 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.97■□□□□ 0.15
AP1S1P61966 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.97■□□□□ 0.15
AP1S1P61966 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.97■□□□□ 0.15
AP1S1P61966 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.97■□□□□ 0.15
AP1S1P61966 AC104794.3-201ENST00000566840 1248 ntBASIC15.97■□□□□ 0.15
AP1S1P61966 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S1P61966 AC092364.2-202ENST00000597012 1073 ntBASIC15.97■□□□□ 0.15
AP1S1P61966 SRD5A3P1-201ENST00000603021 949 ntBASIC15.97■□□□□ 0.15
AP1S1P61966 LINC01115-203ENST00000606068 577 ntBASIC15.97■□□□□ 0.15
AP1S1P61966 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S1P61966 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
AP1S1P61966 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S1P61966 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S1P61966 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.97■□□□□ 0.15
AP1S1P61966 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
AP1S1P61966 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S1P61966 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
AP1S1P61966 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S1P61966 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
AP1S1P61966 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S1P61966 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.96■□□□□ 0.15
AP1S1P61966 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S1P61966 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
AP1S1P61966 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S1P61966 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
AP1S1P61966 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S1P61966 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S1P61966 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S1P61966 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S1P61966 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
AP1S1P61966 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
AP1S1P61966 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
AP1S1P61966 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S1P61966 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
AP1S1P61966 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S1P61966 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S1P61966 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S1P61966 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.96■□□□□ 0.15
AP1S1P61966 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
AP1S1P61966 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.96■□□□□ 0.15
AP1S1P61966 SERBP1P5-201ENST00000510079 1181 ntBASIC15.96■□□□□ 0.15
AP1S1P61966 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S1P61966 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.96■□□□□ 0.15
AP1S1P61966 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.96■□□□□ 0.15
AP1S1P61966 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
AP1S1P61966 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.96■□□□□ 0.15
AP1S1P61966 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
AP1S1P61966 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S1P61966 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.96■□□□□ 0.15
AP1S1P61966 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.96■□□□□ 0.15
AP1S1P61966 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.96■□□□□ 0.15
AP1S1P61966 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.96■□□□□ 0.15
AP1S1P61966 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S1P61966 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S1P61966 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S1P61966 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S1P61966 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP1S1P61966 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP1S1P61966 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
AP1S1P61966 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP1S1P61966 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
AP1S1P61966 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP1S1P61966 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.95■□□□□ 0.14
AP1S1P61966 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
AP1S1P61966 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.95■□□□□ 0.14
AP1S1P61966 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S1P61966 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S1P61966 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S1P61966 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S1P61966 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.95■□□□□ 0.14
AP1S1P61966 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S1P61966 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
AP1S1P61966 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.95■□□□□ 0.14
AP1S1P61966 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S1P61966 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
AP1S1P61966 LINC02199-201ENST00000506655 2702 ntBASIC15.95■□□□□ 0.14
AP1S1P61966 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S1P61966 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S1P61966 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.95■□□□□ 0.14
AP1S1P61966 MIR661-201ENST00000384842 89 ntBASIC15.95■□□□□ 0.14
AP1S1P61966 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S1P61966 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.95■□□□□ 0.14
AP1S1P61966 AC002472.2-201ENST00000442739 958 ntBASIC15.95■□□□□ 0.14
AP1S1P61966 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.95■□□□□ 0.14
AP1S1P61966 SPTLC1P1-201ENST00000447199 261 ntBASIC15.95■□□□□ 0.14
AP1S1P61966 SPDYE18-201ENST00000510091 1050 ntBASIC15.95■□□□□ 0.14
AP1S1P61966 DOC2GP-202ENST00000514950 1163 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms