Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.71■□□□□ 0.11
SRP54P61011 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SRP54P61011 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.71■□□□□ 0.11
SRP54P61011 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.71■□□□□ 0.11
SRP54P61011 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 CU639417.3-201ENST00000624240 1404 ntBASIC15.71■□□□□ 0.11
SRP54P61011 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.71■□□□□ 0.11
SRP54P61011 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.71■□□□□ 0.11
SRP54P61011 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.71■□□□□ 0.11
SRP54P61011 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.71■□□□□ 0.11
SRP54P61011 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.71■□□□□ 0.11
SRP54P61011 AC008494.3-201ENST00000606615 944 ntBASIC15.71■□□□□ 0.11
SRP54P61011 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.71■□□□□ 0.11
SRP54P61011 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.71■□□□□ 0.11
SRP54P61011 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.71■□□□□ 0.11
SRP54P61011 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.71■□□□□ 0.11
SRP54P61011 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SRP54P61011 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.71■□□□□ 0.11
SRP54P61011 Z97205.2-201ENST00000564697 1639 ntBASIC15.71■□□□□ 0.11
SRP54P61011 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SRP54P61011 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.71■□□□□ 0.1
SRP54P61011 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SRP54P61011 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.71■□□□□ 0.1
SRP54P61011 AP001282.1-201ENST00000531301 1499 ntBASIC15.71■□□□□ 0.1
SRP54P61011 AC138969.3-201ENST00000546612 1459 ntBASIC15.71■□□□□ 0.1
SRP54P61011 AC138932.2-201ENST00000548268 1459 ntBASIC15.71■□□□□ 0.1
SRP54P61011 AC126755.4-201ENST00000549796 1459 ntBASIC15.71■□□□□ 0.1
SRP54P61011 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SRP54P61011 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
SRP54P61011 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.71■□□□□ 0.1
SRP54P61011 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SRP54P61011 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.71■□□□□ 0.1
SRP54P61011 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SRP54P61011 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.7■□□□□ 0.1
SRP54P61011 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRP54P61011 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.7■□□□□ 0.1
SRP54P61011 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP54P61011 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.7■□□□□ 0.1
SRP54P61011 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP54P61011 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP54P61011 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
SRP54P61011 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRP54P61011 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP54P61011 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.7■□□□□ 0.1
SRP54P61011 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP54P61011 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP54P61011 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP54P61011 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP54P61011 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.7■□□□□ 0.1
SRP54P61011 AC098614.1-201ENST00000368528 745 ntBASIC15.7■□□□□ 0.1
SRP54P61011 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.7■□□□□ 0.1
SRP54P61011 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRP54P61011 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.7■□□□□ 0.1
SRP54P61011 KRT17P7-201ENST00000451704 1104 ntBASIC15.7■□□□□ 0.1
SRP54P61011 MEIS3P1-201ENST00000495167 958 ntBASIC15.7■□□□□ 0.1
SRP54P61011 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.7■□□□□ 0.1
SRP54P61011 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.7■□□□□ 0.1
SRP54P61011 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRP54P61011 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.7■□□□□ 0.1
SRP54P61011 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.7■□□□□ 0.1
SRP54P61011 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.7■□□□□ 0.1
SRP54P61011 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP54P61011 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.7■□□□□ 0.1
SRP54P61011 AC007431.3-201ENST00000623221 587 ntBASIC15.7■□□□□ 0.1
SRP54P61011 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP54P61011 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRP54P61011 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
SRP54P61011 AC006449.6-201ENST00000612330 2296 ntBASIC15.7■□□□□ 0.1
SRP54P61011 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP54P61011 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP54P61011 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP54P61011 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SRP54P61011 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.7■□□□□ 0.1
SRP54P61011 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.7■□□□□ 0.1
SRP54P61011 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.69■□□□□ 0.1
SRP54P61011 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SRP54P61011 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms